Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 2.1e-98 362.5 198 100.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.2e-45 187.2 174 60.9
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.6e-45 185.3 168 66.1
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.4e-41 173.7 169 63.3
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.2e-38 162.5 166 59.0
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 3.3e-35 152.5 172 54.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.8e-34 149.4 172 52.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 7.0e-33 144.8 174 51.7
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.2e-32 144.1 156 58.3
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.0e-32 143.3 163 54.6
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.6e-32 142.9 172 53.5
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.5e-32 142.5 178 51.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 7.7e-32 141.4 163 54.0
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.3e-31 140.6 167 53.9
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 7.2e-30 134.8 131 62.6
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.1e-29 133.3 169 52.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.3e-28 129.8 170 51.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 3.0e-28 129.4 168 51.2
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 3.0e-28 129.4 160 53.1
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 5.2e-28 128.6 168 51.8
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 8.8e-28 127.9 97 78.4
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.8e-28 127.9 109 73.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.5e-27 127.1 168 49.4
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.5e-27 127.1 172 50.6
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.6e-27 126.3 146 56.2
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.4e-27 125.6 172 49.4
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 7.5e-27 124.8 173 50.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.7e-26 123.6 168 51.2
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.2e-26 123.2 140 57.1
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 3.7e-26 122.5 129 59.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.7e-26 122.5 172 50.6
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 6.3e-26 121.7 164 49.4
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 8.2e-26 121.3 153 54.2
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.4e-25 120.6 111 69.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.8e-25 120.2 175 48.0
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.4e-25 119.8 175 48.6
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.1e-25 119.0 140 57.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 4.1e-25 119.0 95 75.8
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.1e-25 119.0 131 57.3
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 7.0e-25 118.2 149 53.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 7.0e-25 118.2 172 48.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.2e-24 117.5 151 54.3
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.2e-24 117.5 131 58.0
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.2e-24 117.5 147 53.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.6e-24 117.1 168 50.0
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 2.0e-24 116.7 150 54.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.7e-24 116.3 148 50.7
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.7e-24 116.3 168 50.0
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-24 116.3 168 50.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-24 116.3 168 50.0
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.7e-24 116.3 147 55.1
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.5e-24 115.9 128 60.9
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.5e-24 115.9 141 58.9
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 5.9e-24 115.2 128 57.8
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.9e-24 115.2 128 60.9
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 5.9e-24 115.2 158 50.0
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 7.7e-24 114.8 140 54.3
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 7.7e-24 114.8 128 60.2
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.0e-23 114.4 118 64.4
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.0e-23 114.4 128 58.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.0e-23 114.4 167 50.3
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 1.3e-23 114.0 127 59.8
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.3e-23 114.0 128 57.8
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.3e-23 114.0 168 48.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 6.5e-23 111.7 129 60.5
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 6.5e-23 111.7 92 73.9
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 8.5e-23 111.3 167 46.7
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 8.5e-23 111.3 95 71.6
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.1e-22 110.9 157 49.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.1e-22 110.9 172 48.3
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.1e-22 110.9 92 73.9
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.1e-22 110.9 144 52.8
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.5e-22 110.5 91 74.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.9e-22 110.2 110 67.3
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 4.2e-22 109.0 172 42.4
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 4.2e-22 109.0 131 57.3
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 7.2e-22 108.2 168 50.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 3.6e-21 105.9 95 67.4
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.7e-21 105.5 149 48.3
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 6.1e-21 105.1 125 52.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.8e-20 103.6 80 77.5
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.3e-20 103.2 80 77.5
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.0e-20 102.8 90 71.1
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 3.0e-20 102.8 95 66.3
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 3.0e-20 102.8 95 66.3
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.2e-20 102.1 81 80.2
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 6.8e-20 101.7 129 55.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 6.8e-20 101.7 80 77.5
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 8.8e-20 101.3 129 54.3
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.0e-19 100.1 131 57.3
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 7.5e-19 98.2 92 72.8
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 2.2e-18 96.7 82 73.2
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 2.8e-18 96.3 85 74.1
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.7e-18 95.9 92 70.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.8e-18 95.5 152 48.0
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.1e-17 94.4 85 71.8
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.1e-17 92.8 120 55.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.5e-16 89.0 95 60.0
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 7.7e-16 88.2 162 44.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.0e-15 85.5 83 67.5
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.5e-14 84.0 147 43.5
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.2e-13 80.9 96 56.2
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.5e-11 73.9 78 57.7
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 4.3e-06 55.8 72 68.1


User provided reference genes

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