Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 0.0e+00 1225.3 613 100.0
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 0.0e+00 1168.7 660 90.8
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.1e-249 866.7 664 69.0
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 4.2e-246 854.7 664 68.5
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 5.5e-246 854.4 664 68.4
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 1.8e-244 849.4 665 67.8
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 1.5e-206 723.4 665 59.5
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 1.9e-206 723.0 671 59.0
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 5.2e-204 714.9 663 57.8
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.5e-203 713.4 666 58.6
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 6.4e-202 708.0 674 57.1
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 1.1e-201 707.2 663 57.2
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 9.5e-198 694.1 666 57.5
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 6.2e-197 691.4 663 56.6
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.5e-195 686.8 667 56.4
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 1.3e-194 683.7 662 55.3
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 2.2e-194 682.9 663 56.4
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 2.9e-194 682.6 666 56.8
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 6.0e-192 674.9 664 55.3
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 7.8e-192 674.5 663 55.4
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 1.0e-191 674.1 668 55.7
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.7e-191 673.3 663 56.1
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 6.6e-191 671.4 663 56.1
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.1e-190 670.6 665 55.0
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.1e-190 670.6 663 56.6
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 1.5e-190 670.2 660 55.8
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 2.5e-190 669.5 660 56.2
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 5.6e-190 668.3 660 56.2
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 7.3e-190 667.9 640 58.3
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 7.3e-190 667.9 663 54.6
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 2.1e-189 666.4 667 55.3
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 3.6e-189 665.6 653 54.5
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 1.8e-188 663.3 660 55.2
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 1.8e-188 663.3 661 54.9
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 5.8e-187 658.3 693 54.0
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 7.6e-187 657.9 660 54.2
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 9.9e-187 657.5 665 54.7
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 3.8e-186 655.6 662 54.7
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 8.4e-186 654.4 661 54.3
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 8.4e-186 654.4 664 54.8
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 2.4e-185 652.9 663 53.8
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 2.4e-185 652.9 662 53.6
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 3.2e-185 652.5 659 53.1
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 3.2e-185 652.5 663 53.7
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 9.3e-185 651.0 675 53.9
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 2.7e-184 649.4 664 55.6
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 3.5e-184 649.0 667 54.0
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 1.3e-183 647.1 665 54.3
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 3.9e-183 645.6 662 54.1
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.1e-182 644.0 663 53.2
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 2.5e-182 642.9 660 52.3
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 3.3e-182 642.5 652 54.4
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 9.6e-182 641.0 667 53.2
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 1.3e-181 640.6 660 52.4
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.1e-181 639.8 663 53.1
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 2.4e-180 636.3 666 53.8
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 5.3e-180 635.2 668 52.5
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 4.4e-179 632.1 667 52.6
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 2.9e-178 629.4 651 54.2
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 7.1e-177 624.8 667 52.9
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 7.9e-176 621.3 664 51.2
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 2.3e-175 619.8 667 52.8
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 3.0e-175 619.4 671 53.4
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 1.9e-174 616.7 663 53.4
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 1.8e-172 610.1 661 50.4
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 1.8e-172 610.1 660 52.6
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 3.1e-172 609.4 661 49.8
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 7.6e-171 604.7 661 49.9
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 9.9e-171 604.4 667 50.1
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 2.9e-170 602.8 666 49.1
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 3.8e-170 602.4 666 49.2
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 8.4e-170 601.3 733 48.3
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.9e-169 600.1 670 51.5
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 3.2e-169 599.4 668 49.6
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 3.2e-169 599.4 668 49.6
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 4.2e-169 599.0 666 48.8
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 4.2e-169 599.0 666 48.8
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 4.2e-169 599.0 666 48.8
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 2.1e-168 596.7 663 48.9
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 4.6e-168 595.5 673 50.4
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 6.0e-168 595.1 663 49.2
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 6.0e-168 595.1 663 49.0
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 8.7e-167 591.3 658 48.9
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 5.6e-166 588.6 656 49.4
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 7.4e-166 588.2 668 49.0
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 5.3e-164 582.0 664 48.3
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.2e-163 580.9 661 50.1
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 4.2e-161 572.4 688 47.7
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 2.8e-157 559.7 571 54.3
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 4.8e-157 558.9 655 49.9
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 1.7e-154 550.4 657 49.8
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 2.2e-154 550.1 669 48.4
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 8.4e-154 548.1 571 54.5
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.4e-153 547.4 657 49.6
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 6.1e-152 542.0 573 53.8
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 1.1e-150 537.7 668 46.7
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.4e-148 530.8 670 45.2
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 3.2e-145 519.6 667 47.1
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 6.1e-144 515.4 667 44.8
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 8.8e-143 511.5 653 45.5
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 9.4e-137 491.5 576 49.5
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 1.2e-136 491.1 663 44.3
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.0e-135 488.0 661 44.9
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 2.3e-135 486.9 658 46.0
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 5.3e-132 475.7 662 41.5
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 6.8e-119 432.2 675 40.3
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 6.3e-117 425.6 670 40.4
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 1.5e-110 404.4 394 54.6
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 5.6e-89 332.8 310 57.1
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.6e-88 331.3 296 55.1
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 4.0e-87 326.6 325 56.0
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 7.5e-86 322.4 322 56.8
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 3.7e-85 320.1 321 54.8
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 2.8e-80 303.9 322 51.9
vmacro00709 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 5.2e-71 273.1 232 60.8
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 8.9e-71 272.3 676 32.5
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 2.6e-70 270.8 666 31.2
MBI11_g07551_MAGBIO Magnolia biondii HOM05D004461 ORTHO05D005543 1.2e-67 261.9 322 48.8
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 2.5e-65 254.2 670 31.2
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 5.6e-65 253.1 658 30.9
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 7.1e-60 236.1 300 44.7
SHI26120 Sapria himalayana HOM05D004461 ORTHO05D005543 1.0e-58 232.3 269 48.7
SEGI_12893 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 2.4e-55 221.1 327 44.0
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 3.7e-48 197.2 426 33.3
TAR624G0657 Trochodendron aralioides HOM05D004461 ORTHO05D005543 3.7e-48 197.2 157 62.4
TAR624G0217 Trochodendron aralioides HOM05D004461 ORTHO05D005543 5.1e-42 176.8 253 43.1
TAR624G0560 Trochodendron aralioides HOM05D004461 ORTHO05D005543 1.0e-37 162.5 140 60.7
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 3.2e-36 157.5 763 25.6
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 6.7e-34 149.8 96 71.9
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 9.7e-33 146.0 90 76.7
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 2.9e-29 134.4 90 70.0
Gohir.D02G008175 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.5e-28 131.3 102 64.7
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 1.6e-14 85.5 102 46.1
Lsat_1_v5_gn_2_119641 Lactuca sativa HOM05D004461 ORTHO05D029960 1.0e-13 82.8 127 38.6
Lsat_1_v5_gn_3_101581 Lactuca sativa HOM05D004461 ORTHO05D029960 1.3e-13 82.4 124 38.7
Lsat_1_v5_gn_3_104101 Lactuca sativa HOM05D004461 ORTHO05D005543 8.0e-11 73.2 192 33.9
SHI26123 Sapria himalayana HOM05D004461 ORTHO05D029960 1.8e-07 62.0 51 58.8


User provided reference genes

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