Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 2.9e-79 298.5 150 100.0
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 5.9e-77 290.8 150 98.0
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 4.3e-75 284.6 150 96.0
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 8.0e-74 280.4 150 94.7
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 4.0e-73 278.1 161 89.4
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 1.0e-15 87.4 153 34.0
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 1.0e-15 87.4 111 40.5
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 4.2e-14 82.0 116 39.7
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 5.5e-14 81.6 127 37.0
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 7.2e-14 81.3 89 42.7
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 9.3e-14 80.9 127 36.2
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 1.2e-13 80.5 71 46.5
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 4.6e-13 78.6 111 37.8
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 1.0e-12 77.4 106 38.7
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 1.0e-12 77.4 106 38.7
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 1.4e-12 77.0 130 36.2
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 8.8e-12 74.3 127 35.4
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 1.1e-11 73.9 103 36.9
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 2.5e-11 72.8 117 38.5
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 9.1e-09 64.3 90 38.9
DCAR_017399 Daucus carota HOM05D001383 ORTHO05D000309 2.2e-07 59.7 155 31.6
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-07 58.9 76 40.8
SalBow5G4834 Salvia bowleyana HOM05D058812 ORTHO05D009453 3.8e-07 58.9 98 36.7
Aqoxy7G03573 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 5.0e-07 58.5 105 32.4
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 6.5e-07 58.2 73 41.1
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 6.5e-07 58.2 61 45.9
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 6.5e-07 58.2 61 45.9
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 6.5e-07 58.2 61 45.9
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 6.5e-07 58.2 61 45.9
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 6.5e-07 58.2 61 45.9
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 8.5e-07 57.8 69 39.1
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-06 57.4 106 33.0
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 1.1e-06 57.4 106 33.0
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 56.6 76 39.5
SalBow4G0405 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.5e-06 56.2 60 41.7
Gohir.A10G176350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.2e-06 55.8 69 39.1
Gohir.A13G017966 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.2e-06 55.8 69 39.1
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 3.2e-06 55.8 113 30.1
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 3.2e-06 55.8 129 30.2
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-06 55.1 101 31.7
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 5.5e-06 55.1 113 31.9
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 5.5e-06 55.1 99 32.3
Gohir.A13G143901 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.5e-06 55.1 76 39.5
SalBow7G0033 Salvia bowleyana HOM05D008808 ORTHO05D009453 5.5e-06 55.1 66 37.9
Nitab4.5_0001226g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.2e-06 54.7 45 46.7
Nitab4.5_0007534g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.2e-06 54.7 103 33.0
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 9.4e-06 54.3 179 27.9
Eucgr.L00906 Eucalyptus grandis HOM05D015495 ORTHO05D000309 9.4e-06 54.3 149 26.2
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.4e-06 54.3 65 35.4
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 9.4e-06 54.3 74 35.1
Peaxi162Scf01021g00121 Petunia axillaris HOM05D001383 ORTHO05D000309 9.4e-06 54.3 72 37.5


User provided reference genes

Program Settings