Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 3.4e-80 301.6 153 100.0
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.2e-69 266.5 146 93.2
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 2.5e-54 215.7 113 98.2
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 4.0e-52 208.4 145 71.0
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 9.8e-51 203.8 113 92.9
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 5.4e-49 198.0 133 74.4
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 5.4e-49 198.0 145 69.7
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 1.2e-48 196.8 135 74.1
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.0e-48 196.1 143 72.0
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 2.0e-48 196.1 143 72.0
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 3.5e-48 195.3 145 70.3
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.9e-48 194.5 145 71.0
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 1.0e-47 193.7 136 75.7
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 2.9e-47 192.2 132 72.7
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 3.8e-47 191.8 149 68.5
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 8.5e-47 190.7 133 73.7
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 1.1e-46 190.3 133 72.2
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 1.5e-46 189.9 137 70.1
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.5e-46 189.9 142 69.0
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 3.2e-46 188.7 130 74.6
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 4.2e-46 188.3 142 68.3
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 5.5e-46 188.0 131 74.0
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 5.5e-46 188.0 133 69.9
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 7.2e-46 187.6 138 71.0
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 7.2e-46 187.6 138 71.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 2.1e-45 186.0 133 79.7
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 3.6e-45 185.3 134 70.1
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 4.7e-45 184.9 136 67.6
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.1e-45 184.5 138 69.6
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 8.0e-45 184.1 128 72.7
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 8.0e-45 184.1 134 67.9
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.0e-44 183.7 162 63.0
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 1.8e-44 183.0 135 71.1
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 1.8e-44 183.0 135 71.1
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.8e-44 183.0 134 69.4
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 2.3e-44 182.6 133 68.4
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.3e-44 182.6 133 66.9
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 3.0e-44 182.2 133 68.4
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 3.0e-44 182.2 131 70.2
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 4.0e-44 181.8 137 70.1
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 5.2e-44 181.4 131 70.2
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 6.8e-44 181.0 132 69.7
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 6.8e-44 181.0 143 67.1
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 8.8e-44 180.6 132 68.9
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.5e-43 179.9 132 72.0
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 2.0e-43 179.5 138 65.9
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 2.0e-43 179.5 132 68.9
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 2.6e-43 179.1 133 66.9
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 2.6e-43 179.1 132 69.7
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 4.4e-43 178.3 117 81.2
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 5.7e-43 177.9 128 71.1
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.3e-42 176.8 133 66.9
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 2.2e-42 176.0 132 67.4
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.8e-42 175.6 132 70.5
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 4.9e-42 174.9 133 66.2
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 6.3e-42 174.5 133 66.2
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 6.3e-42 174.5 135 65.9
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.1e-41 173.7 128 72.7
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.8e-41 172.9 132 66.7
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 2.4e-41 172.6 134 66.4
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 2.4e-41 172.6 133 65.4
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 4.1e-41 171.8 132 66.7
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 4.1e-41 171.8 132 66.7
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 9.2e-41 170.6 135 66.7
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.2e-40 170.2 127 66.9
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.2e-40 170.2 127 66.9
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.2e-40 170.2 127 66.9
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.2e-40 170.2 127 66.9
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.2e-40 170.2 127 66.9
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 1.6e-40 169.9 129 68.2
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 2.7e-40 169.1 134 66.4
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 4.5e-40 168.3 134 67.9
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.5e-40 168.3 134 68.7
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.3e-39 166.8 147 61.9
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 2.9e-39 165.6 134 65.7
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 5.0e-39 164.9 135 65.9
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 5.0e-39 164.9 133 63.9
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 6.6e-39 164.5 132 66.7
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.1e-38 163.7 166 55.4
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.5e-38 163.3 135 65.9
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 1.9e-38 162.9 124 67.7
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.5e-38 162.5 133 66.9
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 3.3e-38 162.2 133 63.2
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 3.3e-38 162.2 133 66.9
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 5.6e-38 161.4 132 64.4
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 7.3e-38 161.0 152 57.9
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 9.5e-38 160.6 132 62.1
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 9.5e-38 160.6 132 64.4
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.6e-37 159.8 152 57.9
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.6e-37 159.8 152 57.9
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 3.6e-37 158.7 133 63.9
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 6.1e-37 157.9 148 55.4
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 8.0e-37 157.5 152 57.2
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.4e-36 156.8 133 63.9
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.4e-36 156.8 112 68.8
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 3.0e-36 155.6 131 63.4
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 6.8e-36 154.5 131 63.4
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 6.8e-36 154.5 132 62.1
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 6.8e-36 154.5 125 64.0
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 8.9e-36 154.1 134 59.0
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 1.2e-35 153.7 125 62.4
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 3.4e-35 152.1 132 62.1
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 5.7e-35 151.4 134 59.0
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 5.7e-35 151.4 134 58.2
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 7.5e-35 151.0 126 65.1
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 2.9e-34 149.1 132 60.6
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 3.5e-32 142.1 133 58.6
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 3.9e-31 138.7 198 45.5
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 5.0e-31 138.3 122 59.8
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 3.6e-29 132.1 122 54.9
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 4.0e-28 128.6 109 61.5
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.7e-26 123.2 112 59.8
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-25 120.2 62 91.9
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.9e-25 119.8 80 73.8
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 4.7e-21 105.1 70 72.9
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 1.4e-20 103.6 109 50.5
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.0e-19 99.8 77 64.9
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.6e-19 99.4 63 74.6
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.4e-19 99.0 70 70.0
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.4e-19 99.0 70 70.0
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 5.8e-19 98.2 101 56.4
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.8e-19 97.4 83 67.5
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.9e-17 93.2 60 75.0
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.2e-17 92.4 63 71.4
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 4.1e-17 92.0 56 78.6
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 7.8e-16 87.8 96 47.9
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.1e-15 85.1 52 78.8
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.5e-14 80.9 56 71.4
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 3.6e-13 79.0 53 69.8


User provided reference genes

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