Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29000 Striga asiatica HOM05D000265 ORTHO05D022744 2.1e-55 218.8 110 100.0
Manes.01G050800 Manihot esculenta HOM05D000265 ORTHO05D000161 7.6e-13 77.4 58 74.1
Oeu059582.1 Olea europaea HOM05D000265 ORTHO05D000161 1.7e-12 76.3 72 62.5
Duzib205G2037 Durio zibethinus HOM05D000265 ORTHO05D000161 4.9e-12 74.7 114 45.6
Lj8A215T38 Lonicera japonica HOM05D000265 ORTHO05D000161 4.9e-12 74.7 55 74.5
Cc08_g15510 Coffea canephora HOM05D000265 ORTHO05D000161 6.4e-12 74.3 81 55.6
Potri.003G134100 Populus trichocarpa HOM05D000265 ORTHO05D000161 6.4e-12 74.3 58 70.7
Oeu063041.1 Olea europaea HOM05D000265 ORTHO05D000161 8.4e-12 73.9 56 67.9
Sabra01G0072600 Salix brachista HOM05D000265 ORTHO05D000161 8.4e-12 73.9 58 69.0
Dinv38886 Davidia involucrata HOM05D000265 ORTHO05D000161 1.4e-11 73.2 50 80.0
DCAR_027749 Daucus carota HOM05D000265 ORTHO05D000161 1.9e-11 72.8 55 69.1
PSO170G4828 Papaver somniferum HOM05D000265 ORTHO05D000161 1.9e-11 72.8 54 74.1
QL02p032553 Quercus lobata HOM05D000265 ORTHO05D000161 2.4e-11 72.4 115 44.3
Thecc.03G289100 Theobroma cacao HOM05D000265 ORTHO05D000161 2.4e-11 72.4 111 45.9
GSVIVG01019447001 Vitis vinifera HOM05D000265 ORTHO05D000161 2.4e-11 72.4 101 48.5
TAR374G1185 Trochodendron aralioides HOM05D000265 ORTHO05D000161 3.2e-11 72.0 55 70.9
CSS0039766 Camellia sinensis var. sinensis HOM05D000265 ORTHO05D000161 4.2e-11 71.6 55 70.9
Dinv37571 Davidia involucrata HOM05D000265 ORTHO05D000161 4.2e-11 71.6 71 59.2
Hma1.2p1_0216F.1_g091260 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 4.2e-11 71.6 55 70.9
Rhsim02G0237100 Rhododendron simsii HOM05D000265 ORTHO05D000161 4.2e-11 71.6 71 60.6
Sabra03G0096500 Salix brachista HOM05D000265 ORTHO05D000161 4.2e-11 71.6 74 59.5
PSO063G2180 Papaver somniferum HOM05D000265 ORTHO05D000161 5.4e-11 71.2 54 72.2
TWI15G0850 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 5.4e-11 71.2 52 76.9
vmacro11417 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 5.4e-11 71.2 55 70.9
Cpa.g.sc321.1 Carica papaya HOM05D000265 ORTHO05D000161 7.1e-11 70.9 55 69.1
COL.COLO4_08335 Corchorus olitorius HOM05D000265 ORTHO05D000161 1.2e-10 70.1 107 47.7
Duzib084G1058 Durio zibethinus HOM05D000265 ORTHO05D000161 1.2e-10 70.1 55 67.3
Prupe.5G110600 Prunus persica HOM05D000265 ORTHO05D000161 1.2e-10 70.1 81 54.3
DCAR_008525 Daucus carota HOM05D000265 ORTHO05D000161 1.6e-10 69.7 78 55.1
MBI06_g29322_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 1.6e-10 69.7 55 69.1
TAR375G0891 Trochodendron aralioides HOM05D000265 ORTHO05D000161 1.6e-10 69.7 55 70.9
MELO3C005726.2 Cucumis melo HOM05D000265 ORTHO05D000161 2.7e-10 68.9 107 43.9
MD06G1096000 Malus domestica HOM05D000265 ORTHO05D000161 2.7e-10 68.9 51 72.5
MD14G1116200 Malus domestica HOM05D000265 ORTHO05D000161 2.7e-10 68.9 80 53.8
CANSAT21G1046 Cannabis sativa HOM05D000265 ORTHO05D000161 3.5e-10 68.6 74 55.4
CiPaw.12G087200 Carya illinoinensis HOM05D000265 ORTHO05D000161 3.5e-10 68.6 55 67.3
Migut.A00698 Erythranthe guttata HOM05D000265 ORTHO05D000161 3.5e-10 68.6 55 69.1
Potri.001G097300 Populus trichocarpa HOM05D000265 ORTHO05D000161 3.5e-10 68.6 58 67.2
RcHm_v2.0_Chr7g0196101 Rosa chinensis HOM05D000265 ORTHO05D000161 3.5e-10 68.6 52 71.2
TAR636G2745 Trochodendron aralioides HOM05D000265 ORTHO05D000161 3.5e-10 68.6 94 48.9
CiPaw.11G127000 Carya illinoinensis HOM05D000265 ORTHO05D000161 4.6e-10 68.2 55 69.1
CsaV3_5G002280 Cucumis sativus L. HOM05D000265 ORTHO05D000161 4.6e-10 68.2 49 71.4
FvH4_5g03620 Fragaria vesca HOM05D000265 ORTHO05D000161 4.6e-10 68.2 52 71.2
FAN04G1075 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.6e-10 68.2 52 71.2
FAN04G1335 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.6e-10 68.2 52 71.2
FAN08G0335 Fragaria x ananassa HOM05D000265 ORTHO05D022744 4.6e-10 68.2 52 71.2
FAN13G0048 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.6e-10 68.2 52 71.2
FAN18G1792 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.6e-10 68.2 52 71.2
Nn1g01752 Nelumbo nucifera HOM05D000265 ORTHO05D000161 4.6e-10 68.2 49 77.6
Nn7g37332 Nelumbo nucifera HOM05D000265 ORTHO05D000161 4.6e-10 68.2 54 68.5
Ciclev10019573m.g Citrus clementina HOM05D000265 ORTHO05D000161 6.0e-10 67.8 46 78.3
Haze_08719 Corylus avellana HOM05D000265 ORTHO05D000161 6.0e-10 67.8 55 67.3
SalBow1G1830 Salvia bowleyana HOM05D000265 ORTHO05D000161 7.8e-10 67.4 56 64.3
SalBow1G5392 Salvia bowleyana HOM05D000265 ORTHO05D000161 7.8e-10 67.4 56 64.3
FAN08G2953 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.3e-09 66.6 52 69.2
FAN13G1676 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.3e-09 66.6 52 69.2
ClCG01G002160 Citrullus lanatus HOM05D000265 ORTHO05D000161 1.7e-09 66.2 48 70.8
MBI07_g06318_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 1.7e-09 66.2 49 71.4
PGR031G2909 Punica granatum HOM05D000265 ORTHO05D000161 2.3e-09 65.9 55 63.6
Os01g0221600 Oryza sativa ssp. japonica HOM05D000265 ORTHO05D000161 3.0e-09 65.5 53 66.0
Aqoxy7G00184 Aquilegia oxysepala HOM05D000265 ORTHO05D000161 3.9e-09 65.1 46 73.9
Sed0010696 Sechium edule HOM05D000265 ORTHO05D000161 5.1e-09 64.7 52 67.3
Gorai.004G136700 Gossypium raimondii HOM05D000265 ORTHO05D000161 8.7e-09 63.9 55 63.6
MBI07_g38647_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D022744 8.7e-09 63.9 46 73.9
LjContig00312_ERROPOS870357g0025681 Lotus japonicus HOM05D000265 ORTHO05D000161 1.1e-08 63.5 52 65.4
Eucgr.D01793 Eucalyptus grandis HOM05D000265 ORTHO05D000161 1.5e-08 63.2 50 68.0
Manes.02G015000 Manihot esculenta HOM05D000265 ORTHO05D000161 1.9e-08 62.8 46 73.9
Ah.12g052120 Amaranthus hybridus HOM05D000265 ORTHO05D000161 3.3e-08 62.0 51 64.7
Gohir.A08G103400 Gossypium hirsutum HOM05D000265 ORTHO05D000161 3.3e-08 62.0 55 61.8
FAN08G3154 Fragaria x ananassa HOM05D000773 ORTHO05D022744 9.6e-08 60.5 44 75.0
arahy.Tifrunner.gnm1.ann1.5ZY4RD Arachis hypogaea HOM05D000265 ORTHO05D000161 1.6e-07 59.7 46 67.4
Gorai.003G083800 Gossypium raimondii HOM05D000265 ORTHO05D000161 3.6e-07 58.5 53 62.3
ATR0109G004 Amborella trichopoda HOM05D000265 ORTHO05D000161 4.8e-07 58.2 43 69.8
Gohir.D03G080150 Gossypium hirsutum HOM05D000265 ORTHO05D000161 6.2e-07 57.8 43 72.1
ECA233G2398 Erigeron canadensis HOM05D000265 ORTHO05D000161 8.1e-07 57.4 41 75.6
Lsat_1_v5_gn_6_10001 Lactuca sativa HOM05D000265 ORTHO05D000161 8.1e-07 57.4 42 73.8
arahy.Tifrunner.gnm1.ann1.3LM9N0 Arachis hypogaea HOM05D000265 ORTHO05D000161 1.1e-06 57.0 46 65.2
Oeu008842.1 Olea europaea HOM05D000265 ORTHO05D022744 1.4e-06 56.6 52 61.5
HanXRQChr02g0046351 Helianthus annuus HOM05D000265 ORTHO05D000161 1.8e-06 56.2 82 42.7
Phvul.002G161300 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 1.8e-06 56.2 44 65.9
THA.LOC104809651 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 3.1e-06 55.5 48 62.5
Glyma.01G223300 Glycine max HOM05D000265 ORTHO05D000161 4.0e-06 55.1 44 65.9
HanXRQChr16g0499741 Helianthus annuus HOM05D000265 ORTHO05D000161 5.3e-06 54.7 58 51.7
HanXRQChr02g0041181 Helianthus annuus HOM05D000265 ORTHO05D000161 9.0e-06 53.9 96 38.5


User provided reference genes

Program Settings