Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G28975 Striga asiatica HOM05D000405 ORTHO05D000974 2.2e-52 208.8 109 100.0
SGA_v2.0_scaffold305G47944 Striga asiatica HOM05D000405 ORTHO05D000974 8.3e-28 127.1 108 68.5
Oeu061100.1 Olea europaea HOM05D000405 ORTHO05D000974 3.6e-23 111.7 108 56.5
Oeu038576.2 Olea europaea HOM05D000405 ORTHO05D000974 2.2e-20 102.4 108 51.9
Migut.A00671 Erythranthe guttata HOM05D000405 ORTHO05D000974 1.1e-19 100.1 109 54.1
SalBow1G7256 Salvia bowleyana HOM05D000405 ORTHO05D000974 2.9e-17 92.0 108 53.7
SalBow1G8171 Salvia bowleyana HOM05D000405 ORTHO05D000974 2.9e-17 92.0 108 53.7
SGA_v2.0_scaffold111G31418 Striga asiatica HOM05D000405 ORTHO05D000974 2.5e-16 89.0 108 52.8
Dinv38848 Davidia involucrata HOM05D000405 ORTHO05D000974 7.3e-16 87.4 109 47.7
Rhsim07G0083100 Rhododendron simsii HOM05D000405 ORTHO05D000974 3.0e-14 82.0 108 44.4
MELO3C016281.2 Cucumis melo HOM05D000405 ORTHO05D000974 2.0e-13 79.3 108 42.6
SalBow8G0197 Salvia bowleyana HOM05D000405 ORTHO05D000974 2.0e-13 79.3 109 48.6
Atru.chr9.2017 Acer truncatum HOM05D000405 ORTHO05D000974 5.8e-13 77.8 116 44.8
Actinidia22725 Actinidia chinensis HOM05D000405 ORTHO05D000974 5.8e-13 77.8 108 44.4
Cc08_g15910 Coffea canephora HOM05D000405 ORTHO05D000974 5.8e-13 77.8 110 45.5
vmacro13904 Vaccinium macrocarpon HOM05D000405 ORTHO05D000974 5.8e-13 77.8 108 43.5
TWI81G0368 Tripterygium wilfordii HOM05D000405 ORTHO05D000974 7.5e-13 77.4 107 43.0
CsaV3_4G006480 Cucumis sativus L. HOM05D000405 ORTHO05D000974 9.8e-13 77.0 108 41.7
Migut.E01246 Erythranthe guttata HOM05D000405 ORTHO05D000974 1.3e-12 76.6 86 51.2
Peaxi162Scf00102g01741 Petunia axillaris HOM05D000405 ORTHO05D000974 1.7e-12 76.3 113 46.0
Eucgr.E00850 Eucalyptus grandis HOM05D000405 ORTHO05D000974 3.7e-12 75.1 108 40.7
TWI60G1285 Tripterygium wilfordii HOM05D000405 ORTHO05D000974 3.7e-12 75.1 108 44.4
Sed0014722 Sechium edule HOM05D000405 ORTHO05D000974 4.9e-12 74.7 108 40.7
PGSC0003DMG400005835 Solanum tuberosum HOM05D000405 ORTHO05D000974 6.4e-12 74.3 113 46.9
Duzib068G0298 Durio zibethinus HOM05D000405 ORTHO05D000974 8.3e-12 73.9 109 45.9
Gohir.A12G235400 Gossypium hirsutum HOM05D000405 ORTHO05D000974 1.1e-11 73.6 111 43.2
Potri.001G092900 Populus trichocarpa HOM05D000405 ORTHO05D000974 1.4e-11 73.2 108 41.7
Sopen08g004130 Solanum pennellii HOM05D000405 ORTHO05D000974 1.4e-11 73.2 92 48.9
GSVIVG01019511001 Vitis vinifera HOM05D000405 ORTHO05D000974 1.4e-11 73.2 111 38.7
Potri.003G138600 Populus trichocarpa HOM05D000405 ORTHO05D000974 1.9e-11 72.8 108 41.7
Hma1.2p1_0952F.1_g241040 Hydrangea macrophylla HOM05D000405 ORTHO05D000974 2.4e-11 72.4 103 40.8
Thecc.03G294800 Theobroma cacao HOM05D000405 ORTHO05D000974 2.4e-11 72.4 109 44.0
Hma1.2p1_0359F.1_g135330 Hydrangea macrophylla HOM05D000405 ORTHO05D000974 3.2e-11 72.0 102 44.1
ClCG07G014950 Citrullus lanatus HOM05D000405 ORTHO05D000974 4.1e-11 71.6 108 39.8
Ciclev10021038m.g Citrus clementina HOM05D000405 ORTHO05D000974 4.1e-11 71.6 109 45.0
Gohir.D12G236600 Gossypium hirsutum HOM05D000405 ORTHO05D000974 5.4e-11 71.2 111 43.2
Gorai.008G253300 Gossypium raimondii HOM05D000405 ORTHO05D000974 5.4e-11 71.2 111 43.2
PGR042G2596 Punica granatum HOM05D000405 ORTHO05D000974 5.4e-11 71.2 115 40.9
Duzib205G1628 Durio zibethinus HOM05D000405 ORTHO05D000974 7.0e-11 70.9 109 44.0
TAR629G3330 Trochodendron aralioides HOM05D000405 ORTHO05D000974 7.0e-11 70.9 108 39.8
Cfa022929 Carpinus fangiana HOM05D000405 ORTHO05D000974 9.2e-11 70.5 111 45.0
Haze_08635 Corylus avellana HOM05D000405 ORTHO05D000974 9.2e-11 70.5 111 45.0
Solyc08g008280.3 Solanum lycopersicum HOM05D000405 ORTHO05D000974 9.2e-11 70.5 92 47.8
COL.COLO4_10672 Corchorus olitorius HOM05D000405 ORTHO05D000974 1.2e-10 70.1 114 42.1
Lj2A170T35 Lonicera japonica HOM05D000405 ORTHO05D000974 1.6e-10 69.7 109 40.4
Duzib084G0273 Durio zibethinus HOM05D000405 ORTHO05D000974 2.0e-10 69.3 109 45.0
Manes.02G011500 Manihot esculenta HOM05D000405 ORTHO05D000974 2.7e-10 68.9 109 41.3
arahy.Tifrunner.gnm1.ann1.LLK29R Arachis hypogaea HOM05D000405 ORTHO05D000974 3.5e-10 68.6 103 46.6
Nitab4.5_0006656g0060 Nicotiana tabacum HOM05D000405 ORTHO05D000974 7.8e-10 67.4 97 47.4
QL02p031046 Quercus lobata HOM05D000405 ORTHO05D000974 7.8e-10 67.4 109 41.3
Hund11399 Selenicereus undatus HOM05D000405 ORTHO05D000974 7.8e-10 67.4 95 42.1
CiPaw.12G084300 Carya illinoinensis HOM05D000405 ORTHO05D000974 1.0e-09 67.0 109 37.6
Nitab4.5_0002944g0110 Nicotiana tabacum HOM05D000405 ORTHO05D000974 1.0e-09 67.0 94 46.8
CAN.G792.45 Capsicum annuum HOM05D000405 ORTHO05D000974 1.7e-09 66.2 110 40.0
Nitab4.5_0006656g0070 Nicotiana tabacum HOM05D000405 ORTHO05D000974 2.3e-09 65.9 94 45.7
Oeu038493.1 Olea europaea HOM05D000405 ORTHO05D000974 2.3e-09 65.9 109 38.5
Gohir.A08G100100 Gossypium hirsutum HOM05D000405 ORTHO05D000974 3.0e-09 65.5 110 42.7
Sabra03G0099800 Salix brachista HOM05D000405 ORTHO05D000974 3.0e-09 65.5 108 39.8
Gohir.D08G131700 Gossypium hirsutum HOM05D000405 ORTHO05D000974 5.0e-09 64.7 110 42.7
Gorai.004G134600 Gossypium raimondii HOM05D000405 ORTHO05D000974 5.0e-09 64.7 110 42.7
Sabra01G0069300 Salix brachista HOM05D000405 ORTHO05D000974 8.6e-09 63.9 68 48.5
PGSC0003DMG400005836 Solanum tuberosum HOM05D000405 ORTHO05D000974 3.3e-08 62.0 109 42.2
Sed0020692 Sechium edule HOM05D000405 ORTHO05D000974 4.3e-08 61.6 112 38.4
Cpa.g.sc79.60 Carica papaya HOM05D000405 ORTHO05D000974 7.3e-08 60.8 101 39.6
arahy.Tifrunner.gnm1.ann1.EVAW89 Arachis hypogaea HOM05D000405 ORTHO05D000974 1.2e-07 60.1 105 41.9
Prupe.5G117000 Prunus persica HOM05D000405 ORTHO05D000974 1.2e-07 60.1 108 38.9
CAN.G792.44 Capsicum annuum HOM05D000405 ORTHO05D000974 2.1e-07 59.3 116 43.1
Nitab4.5_0002944g0100 Nicotiana tabacum HOM05D000405 ORTHO05D000974 2.1e-07 59.3 102 40.2
CAN.G792.43 Capsicum annuum HOM05D000405 ORTHO05D000974 2.8e-07 58.9 80 42.5
Nitab4.5_0000223g0340 Nicotiana tabacum HOM05D000405 ORTHO05D000974 3.6e-07 58.5 120 40.8
TAR375G0420 Trochodendron aralioides HOM05D000405 ORTHO05D000974 3.6e-07 58.5 108 40.7
DCAR_027713 Daucus carota HOM05D000405 ORTHO05D000974 6.2e-07 57.8 111 39.6
HanXRQChr03g0085191 Helianthus annuus HOM05D000405 ORTHO05D000974 6.2e-07 57.8 100 36.0
CSS0024734 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000974 8.0e-07 57.4 109 36.7
Manes.01G047200 Manihot esculenta HOM05D000405 ORTHO05D000974 8.0e-07 57.4 118 35.6
EL10Ac5g12898 Beta vulgaris HOM05D000405 ORTHO05D000974 1.1e-06 57.0 105 39.0
Cpa.g.c32256 Carica papaya HOM05D000405 ORTHO05D000974 1.1e-06 57.0 110 34.5
MD14G1123000 Malus domestica HOM05D000405 ORTHO05D000974 1.1e-06 57.0 108 37.0
Nitab4.5_0007099g0040 Nicotiana tabacum HOM05D000405 ORTHO05D000974 1.1e-06 57.0 114 43.0
Actinidia08628 Actinidia chinensis HOM05D000405 ORTHO05D000974 1.4e-06 56.6 104 34.6
arahy.Tifrunner.gnm1.ann1.WH6N3S Arachis hypogaea HOM05D000405 ORTHO05D000974 1.4e-06 56.6 112 37.5
Solyc08g082110.4 Solanum lycopersicum HOM05D000405 ORTHO05D000974 1.4e-06 56.6 94 39.4
Oeu024462.1 Olea europaea HOM05D000405 ORTHO05D000974 1.8e-06 56.2 104 34.6
PGSC0003DMG400012160 Solanum tuberosum HOM05D000405 ORTHO05D000974 1.8e-06 56.2 94 38.3
Dinv35308 Davidia involucrata HOM05D000405 ORTHO05D000974 3.1e-06 55.5 112 32.1
arahy.Tifrunner.gnm1.ann1.KK3V44 Arachis hypogaea HOM05D000405 ORTHO05D000974 4.0e-06 55.1 110 37.3
CSS0002614 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000974 4.0e-06 55.1 109 35.8
Lj4g0016553 Lotus japonicus HOM05D000405 ORTHO05D000974 4.0e-06 55.1 113 38.1
Actinidia34199 Actinidia chinensis HOM05D000405 ORTHO05D000974 5.2e-06 54.7 104 36.5
unitig_32.g11610 Utricularia gibba HOM05D000405 ORTHO05D000974 5.2e-06 54.7 110 40.0
CiPaw.01G073900 Carya illinoinensis HOM05D000405 ORTHO05D000974 8.9e-06 53.9 104 37.5
Thecc.01G345300 Theobroma cacao HOM05D000405 ORTHO05D000974 8.9e-06 53.9 109 36.7


User provided reference genes

Program Settings