Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.5e-300 1035.4 526 100.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 2.2e-86 323.9 328 57.0
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.1e-84 317.4 326 56.1
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 6.1e-84 315.8 326 55.8
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 5.1e-83 312.8 328 55.5
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.4e-80 304.7 328 53.0
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.5e-79 301.2 269 60.2
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 7.7e-79 298.9 329 52.9
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.7e-78 297.7 295 55.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.9e-78 297.0 277 57.0
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 1.4e-77 294.7 326 51.5
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.6e-76 290.0 300 53.3
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 4.6e-76 289.7 300 55.0
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.6e-76 289.7 280 56.8
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 4.6e-76 289.7 284 55.3
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 6.1e-76 289.3 276 57.2
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.4e-75 288.1 286 56.3
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.4e-75 288.1 294 55.4
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.8e-75 287.7 297 54.9
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.3e-75 287.3 288 54.5
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.1e-75 286.2 177 78.5
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 6.7e-75 285.8 297 54.2
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 6.7e-75 285.8 278 56.1
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.1e-74 285.0 329 51.1
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.1e-74 285.0 330 51.2
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 4.3e-74 283.1 297 51.5
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 4.3e-74 283.1 323 51.7
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.3e-74 283.1 284 54.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 5.7e-74 282.7 274 54.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 7.4e-74 282.3 281 54.4
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.2e-73 280.8 277 56.7
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.2e-73 280.8 302 53.6
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 2.2e-73 280.8 275 54.9
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.2e-73 280.8 327 50.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.8e-73 280.4 287 55.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.8e-73 280.4 337 49.3
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 3.7e-73 280.0 286 53.1
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.8e-72 277.7 328 49.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.4e-72 277.3 302 51.7
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.4e-72 277.3 280 53.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 4.1e-72 276.6 178 75.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 6.9e-72 275.8 284 52.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 6.9e-72 275.8 297 50.8
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.5e-71 274.6 301 51.2
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.6e-71 273.9 303 50.2
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.6e-71 273.9 302 51.0
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.4e-71 273.5 302 50.0
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 4.5e-71 273.1 280 54.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.5e-71 273.1 327 48.0
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.9e-71 272.7 281 52.7
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 7.7e-71 272.3 326 46.6
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 7.7e-71 272.3 280 53.9
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.2e-70 270.8 279 51.6
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.9e-70 270.4 281 51.6
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.8e-70 270.0 303 49.2
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 5.0e-70 269.6 297 51.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 6.5e-70 269.2 291 51.9
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 8.5e-70 268.9 303 49.2
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 8.5e-70 268.9 303 49.2
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 8.5e-70 268.9 181 73.5
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.4e-69 268.1 179 74.3
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 3.2e-69 266.9 302 51.0
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.2e-68 265.0 279 52.7
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.2e-68 265.0 298 49.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.2e-68 265.0 278 51.4
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-68 265.0 176 75.6
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.2e-68 265.0 276 51.1
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.6e-68 264.6 288 51.4
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 3.6e-68 263.5 303 48.5
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 3.6e-68 263.5 326 47.2
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.7e-68 263.1 182 72.5
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 6.1e-68 262.7 297 48.8
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 6.1e-68 262.7 296 49.3
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 6.1e-68 262.7 280 52.1
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.0e-67 261.9 303 48.5
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.8e-67 261.2 277 50.5
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.3e-67 260.8 283 52.3
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.0e-67 260.4 288 51.7
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 5.1e-67 259.6 303 47.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 6.7e-67 259.2 296 49.3
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.1e-66 258.5 294 49.7
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.7e-66 256.1 180 69.4
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 4.8e-65 253.1 292 50.0
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.1e-64 251.9 178 69.1
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.4e-64 251.5 285 49.5
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 5.3e-64 249.6 286 49.3
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 2.6e-63 247.3 180 67.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.6e-63 247.3 181 65.2
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.5e-63 246.9 178 66.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 2.9e-62 243.8 286 46.9
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.2e-60 238.4 191 62.8
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.2e-60 238.4 300 45.3
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.6e-60 238.0 286 48.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 8.0e-60 235.7 291 46.0
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 8.0e-60 235.7 156 75.0
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 4.0e-59 233.4 178 65.2
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.7e-57 228.0 292 44.9
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.8e-56 224.6 287 45.6
SGA_v2.0_scaffold56G20090 Striga asiatica HOM05D046444 ORTHO05D007845 1.7e-49 201.4 108 85.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.1e-48 195.7 180 60.6
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 5.9e-47 193.0 216 47.7
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.1e-45 188.7 182 51.1
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.2e-45 186.8 227 45.8
SGA_v2.0_scaffold34G13743 Striga asiatica HOM05D046444 ORTHO05D007845 1.3e-41 175.3 96 84.4
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.9e-41 173.3 211 46.4
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.6e-39 168.3 112 78.6
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.5e-37 161.0 113 64.6
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.0e-35 155.6 110 75.5
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.8e-35 154.8 205 42.9
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.0e-35 153.7 192 45.8
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 5.6e-29 133.3 215 39.1
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-28 132.1 89 78.7
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.6e-28 131.7 91 69.2
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 3.6e-28 130.6 82 73.2
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 8.3e-25 119.4 191 39.3
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.0e-22 112.5 88 59.1
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 1.7e-22 111.7 110 59.1
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.3e-22 111.3 83 72.3
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 3.0e-22 110.9 68 72.1
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 3.3e-21 107.5 79 63.3
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 7.3e-21 106.3 87 64.4
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 9.5e-21 105.9 64 76.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 3.6e-20 104.0 215 33.5
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.0e-14 85.9 68 67.6
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.5e-13 82.0 67 64.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.4e-10 70.5 47 74.5


User provided reference genes

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