Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 7.0e-221 770.4 408 100.0
Migut.J01735 Erythranthe guttata HOM05D015573 ORTHO05D010602 1.7e-41 174.5 191 58.1
SGA_v2.0_scaffold105G30383 Striga asiatica HOM05D015573 ORTHO05D017203 2.2e-41 174.1 170 66.5
SGA_v2.0_scaffold32G13151 Striga asiatica HOM05D000068 ORTHO05D008806 1.5e-34 151.4 148 60.1
MBI15_g22231_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.4e-16 91.7 129 45.7
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 1.1e-13 82.0 175 34.9
Manes.01G120601 Manihot esculenta HOM05D014563 ORTHO05D010602 3.3e-13 80.5 160 38.1
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 4.3e-13 80.1 203 36.5
ATR0787G152 Amborella trichopoda HOM05D015573 ORTHO05D010602 4.8e-12 76.6 87 52.9
Zm00001eb323950 Zea mays HOM05D010444 ORTHO05D010602 6.3e-12 76.3 211 33.6
MBI17_g19025_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.8e-11 74.7 106 44.3
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 3.1e-11 73.9 185 34.6
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 3.1e-11 73.9 180 35.0
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 4.1e-11 73.6 172 36.0
CiPaw.09G003700 Carya illinoinensis HOM05D014563 ORTHO05D010602 1.2e-10 72.0 168 35.1
Manes.12G036450 Manihot esculenta HOM05D014563 ORTHO05D010602 2.6e-10 70.9 183 33.9
Os04g0556550 Oryza sativa ssp. japonica HOM05D015573 ORTHO05D010602 2.6e-10 70.9 117 44.4
MBI15_g22229_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.0e-09 68.9 78 47.4
EL10Ac3g07121 Beta vulgaris HOM05D015573 ORTHO05D010602 1.3e-09 68.6 85 48.2
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 1.3e-09 68.6 128 37.5
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.2e-09 67.8 64 54.7
SGA_v2.0_scaffold89G27548 Striga asiatica HOM05D010444 ORTHO05D010602 2.9e-09 67.4 112 42.0
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 1.4e-08 65.1 181 34.8
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 3.2e-08 63.9 116 41.4
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 5.5e-08 63.2 125 43.2
SGA_v2.0_scaffold90G27610 Striga asiatica HOM05D010444 ORTHO05D010602 5.5e-08 63.2 113 38.9
MBI14_g08068_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 9.4e-08 62.4 131 38.2
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 9.4e-08 62.4 119 34.5
SGA_v2.0_scaffold413G51163 Striga asiatica HOM05D010444 ORTHO05D051413 1.2e-07 62.0 132 38.6
CiPaw.15G057400 Carya illinoinensis HOM05D014563 ORTHO05D010602 2.1e-07 61.2 102 41.2
AT4G34139 Arabidopsis thaliana HOM05D014563 ORTHO05D010602 2.7e-07 60.8 169 33.7
CiPaw.10G145000 Carya illinoinensis HOM05D011587 ORTHO05D010602 1.4e-06 58.5 186 32.3
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 1.8e-06 58.2 178 32.0
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 1.8e-06 58.2 229 31.9
MELO3C031770.2 Cucumis melo HOM05D011891 ORTHO05D014146 3.0e-06 57.4 56 44.6
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 3.9e-06 57.0 147 29.9
Thecc.02G108600 Theobroma cacao HOM05D011891 ORTHO05D014146 3.9e-06 57.0 56 42.9


User provided reference genes

Program Settings