Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G28933 Striga asiatica HOM05D061221 ORTHO05D031618 1.3e-63 246.5 154 100.0
Migut.B00278 Erythranthe guttata HOM05D061221 ORTHO05D031618 7.1e-17 91.3 92 52.2
COL.COLO4_20363 Corchorus olitorius HOM05D000071 ORTHO05D000029 4.9e-10 68.6 112 35.7
CAN.G321.44 Capsicum annuum HOM05D000071 ORTHO05D000029 4.2e-09 65.5 110 40.9
Duzib114G0827 Durio zibethinus HOM05D000071 ORTHO05D000029 1.2e-08 63.9 110 38.2
CAN.G905.32 Capsicum annuum HOM05D000071 ORTHO05D000029 4.6e-08 62.0 98 41.8
Gohir.A09G181250 Gossypium hirsutum HOM05D000071 ORTHO05D000029 6.0e-08 61.6 110 35.5
GSVIVG01001804001 Vitis vinifera HOM05D000071 ORTHO05D000029 6.0e-08 61.6 118 39.8
CSS0025098 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.0e-07 60.8 108 33.3
CSS0046869 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.0e-07 60.8 108 33.3
HanXRQChr08g0215961 Helianthus annuus HOM05D000071 ORTHO05D000029 1.0e-07 60.8 108 38.0
Manes.12G001300 Manihot esculenta HOM05D000071 ORTHO05D000029 1.0e-07 60.8 105 36.2
QL05p008200 Quercus lobata HOM05D000071 ORTHO05D000029 1.8e-07 60.1 108 35.2
HanXRQChr08g0215771 Helianthus annuus HOM05D000071 ORTHO05D000029 2.3e-07 59.7 108 37.0
CSS0004324 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 5.1e-07 58.5 108 33.3
CSS0021909 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 5.1e-07 58.5 99 37.4
COL.COLO4_20701 Corchorus olitorius HOM05D000071 ORTHO05D000029 8.7e-07 57.8 112 36.6
Lsat_1_v5_gn_4_85660 Lactuca sativa HOM05D000071 ORTHO05D000029 8.7e-07 57.8 108 38.0
COL.COLO4_20700 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.5e-06 57.0 109 29.4
Sed0028160 Sechium edule HOM05D000071 ORTHO05D000029 1.5e-06 57.0 88 35.2
CSS0019293 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.9e-06 56.6 102 38.2
arahy.Tifrunner.gnm1.ann1.J1YFQ5 Arachis hypogaea HOM05D000071 ORTHO05D000029 3.3e-06 55.8 79 43.0
Lsat_1_v5_gn_8_13781 Lactuca sativa HOM05D000071 ORTHO05D000029 3.3e-06 55.8 111 36.0
QL03p053955 Quercus lobata HOM05D000071 ORTHO05D000029 3.3e-06 55.8 106 32.1
Rhsim03G0182000 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.3e-06 55.5 111 37.8
Rhsim03G0185100 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.3e-06 55.5 78 44.9
Medtr6g038700 Medicago truncatula HOM05D000071 ORTHO05D000029 5.6e-06 55.1 100 37.0
RcHm_v2.0_Chr3g0470501 Rosa chinensis HOM05D000071 ORTHO05D000029 5.6e-06 55.1 110 33.6
Solyc01g099250.3 Solanum lycopersicum HOM05D000071 ORTHO05D000029 5.6e-06 55.1 111 37.8
Medtr6g037750 Medicago truncatula HOM05D000071 ORTHO05D000029 9.6e-06 54.3 99 38.4


User provided reference genes

Program Settings