Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 0.0e+00 1297.7 623 100.0
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.1e-289 999.6 628 75.3
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.9e-286 988.8 627 74.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.2e-267 926.4 631 71.2
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.7e-264 915.2 628 70.5
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.7e-264 915.2 576 74.3
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.0e-263 913.3 630 71.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.7e-263 912.5 633 69.2
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 3.9e-263 911.4 633 69.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.1e-262 909.8 623 70.0
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.3e-262 907.9 677 66.6
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 9.5e-262 906.7 581 72.8
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.2e-261 906.4 663 67.1
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.1e-261 905.6 634 68.3
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 4.7e-261 904.4 627 69.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 8.1e-261 903.7 623 69.0
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.0e-260 901.4 587 72.4
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 8.9e-260 900.2 626 68.2
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.0e-259 899.0 587 72.1
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.7e-258 894.8 604 70.4
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 4.9e-258 894.4 581 71.9
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 2.4e-257 892.1 585 70.8
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 4.1e-257 891.3 596 70.0
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 4.1e-257 891.3 609 69.0
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 5.4e-257 891.0 641 67.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 9.2e-257 890.2 640 66.7
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.2e-256 889.8 603 68.7
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.6e-256 889.4 623 68.9
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 2.7e-256 888.6 594 69.4
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 6.0e-256 887.5 619 68.0
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.3e-255 886.3 710 61.8
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.5e-254 882.9 581 70.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 4.3e-254 881.3 619 67.2
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 9.5e-254 880.2 585 69.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.2e-253 879.8 635 67.2
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.6e-253 878.2 598 68.6
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.1e-252 876.7 646 65.6
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 6.8e-252 874.0 572 71.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 6.8e-252 874.0 590 69.7
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 8.9e-252 873.6 593 70.2
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 8.9e-252 873.6 621 65.9
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.0e-251 872.5 645 65.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 4.4e-251 871.3 577 70.9
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 3.7e-250 868.2 586 69.1
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.9e-249 865.9 576 70.1
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 4.1e-249 864.8 579 69.3
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 5.4e-249 864.4 571 72.0
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 1.6e-248 862.8 584 68.8
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 4.6e-248 861.3 574 68.8
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.3e-247 859.8 629 65.5
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.3e-247 859.0 586 68.8
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.0e-247 858.6 592 69.3
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.0e-247 858.6 629 65.3
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.1e-246 856.7 588 68.4
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.1e-246 856.7 629 65.3
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.9e-246 855.9 629 65.3
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.6e-245 852.8 636 65.9
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.6e-245 852.8 618 65.9
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.6e-245 852.8 576 69.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.8e-245 852.0 583 69.0
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 3.6e-245 851.7 577 69.0
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 6.2e-245 850.9 585 67.9
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 8.1e-245 850.5 583 68.8
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.8e-244 849.4 589 67.1
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 7.6e-243 844.0 592 67.1
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 4.9e-242 841.3 571 68.8
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.4e-241 839.7 629 65.3
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.6e-240 836.3 579 68.0
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 4.6e-240 834.7 626 65.3
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 6.2e-237 824.3 558 68.8
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.2e-237 824.3 577 68.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 5.3e-236 821.2 602 65.8
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 8.4e-234 813.9 580 65.3
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 4.2e-233 811.6 581 67.0
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 3.0e-231 805.4 602 64.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 7.3e-230 800.8 592 65.4
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 9.6e-230 800.4 617 63.5
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 2.8e-229 798.9 541 68.8
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.4e-228 796.6 576 65.6
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.2e-227 793.5 624 62.2
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.5e-227 793.1 618 63.4
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.5e-227 793.1 618 63.4
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 9.9e-227 790.4 614 63.7
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 2.2e-226 789.3 576 64.6
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.6e-224 783.1 592 64.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 7.9e-224 780.8 617 63.2
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.3e-223 779.2 586 64.0
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.8e-220 769.6 628 60.4
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 5.8e-219 764.6 614 62.1
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 8.2e-205 717.6 573 62.1
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 7.2e-201 704.5 572 60.3
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.8e-199 699.9 629 57.1
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 5.9e-187 658.3 631 54.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 7.2e-185 651.4 546 57.0
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 2.4e-180 636.3 630 52.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 3.2e-177 625.9 579 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 6.3e-173 611.7 621 52.3
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.5e-170 601.3 493 59.8
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.5e-169 600.5 588 51.5
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 2.8e-165 586.3 640 49.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.6e-160 569.3 374 69.0
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.4e-127 461.1 530 49.2
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 9.6e-113 411.8 254 76.4
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 3.9e-98 363.2 194 89.2
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 4.8e-88 329.7 210 72.4
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 8.2e-80 302.4 207 71.5
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 5.2e-58 229.9 218 55.0
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 7.5e-49 199.5 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 3.0e-37 161.0 133 55.6
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 1.9e-28 131.7 110 56.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 5.6e-28 130.2 80 77.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 2.0e-25 121.7 65 81.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 3.2e-23 114.4 65 78.5
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.6e-17 94.7 72 62.5
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 4.6e-14 84.0 43 88.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.3e-13 82.4 37 97.3
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.4e-10 72.4 126 36.5
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.4e-10 71.6 39 79.5
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 3.4e-09 67.8 127 44.9


User provided reference genes

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