Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 0.0e+00 1186.0 671 100.0
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 2.6e-212 742.7 683 63.7
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 7.8e-185 651.4 706 56.7
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.8e-184 649.0 701 56.3
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 2.0e-180 636.7 693 56.7
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 4.9e-179 632.1 696 57.5
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 2.4e-178 629.8 693 57.6
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 7.8e-177 624.8 718 54.9
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 7.8e-177 624.8 696 57.2
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.8e-174 616.3 664 57.8
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.8e-173 613.6 675 53.6
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.3e-173 613.2 680 55.0
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 3.1e-173 612.8 674 54.0
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 8.9e-173 611.3 673 56.0
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 9.8e-172 607.8 636 57.9
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.9e-171 606.3 690 55.4
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 6.0e-169 598.6 668 52.4
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 1.0e-168 597.8 673 55.3
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 2.3e-168 596.7 695 54.0
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 6.6e-168 595.1 665 54.9
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.5e-167 593.2 667 57.6
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 2.5e-167 593.2 668 54.6
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 2.1e-166 590.1 676 54.7
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 2.8e-166 589.7 664 55.0
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 8.1e-166 588.2 665 54.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.4e-165 587.4 661 54.8
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.9e-162 577.0 661 55.2
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 5.4e-162 575.5 525 57.7
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.2e-161 574.3 666 55.6
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 7.8e-161 571.6 649 54.9
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.0e-160 571.2 671 56.2
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.1e-159 567.8 676 51.0
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 9.5e-159 564.7 672 51.0
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.6e-158 563.9 668 52.5
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.1e-158 563.5 673 53.2
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 8.1e-158 561.6 671 55.9
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 1.4e-157 560.8 716 50.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 5.2e-157 558.9 657 53.3
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 6.8e-157 558.5 668 51.5
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 8.9e-157 558.1 679 55.4
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 3.4e-156 556.2 681 52.4
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 7.6e-156 555.1 662 52.1
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 9.9e-156 554.7 665 51.6
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.2e-155 553.5 670 53.6
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 1.1e-154 551.2 671 50.5
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.2e-154 549.3 677 55.2
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 5.4e-154 548.9 663 52.5
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 9.2e-154 548.1 693 54.5
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.2e-153 547.7 670 52.7
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 2.7e-153 546.6 669 47.4
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 3.5e-153 546.2 668 49.7
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.3e-152 544.3 673 50.8
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.0e-152 543.1 687 53.4
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 3.9e-152 542.7 675 53.9
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.1e-151 541.2 666 53.5
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.5e-151 540.8 669 51.6
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.5e-151 540.0 695 52.2
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.6e-150 537.3 687 52.5
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.4e-149 534.3 681 53.0
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 9.0e-149 531.6 677 50.2
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 1.5e-148 530.8 652 54.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 9.9e-148 528.1 690 50.4
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 8.4e-147 525.0 692 48.7
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.1e-146 524.6 666 51.4
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 5.4e-146 522.3 671 52.8
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.3e-144 517.7 665 49.3
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.3e-144 516.9 677 50.8
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 7.3e-143 511.9 577 52.3
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.3e-142 511.1 676 51.0
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 3.6e-142 509.6 655 50.1
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.4e-141 507.7 552 56.7
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.5e-140 504.2 668 49.9
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 2.2e-139 500.4 517 54.5
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 6.4e-139 498.8 686 45.6
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.4e-138 497.7 640 52.3
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 3.2e-138 496.5 515 54.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 5.4e-138 495.7 717 47.0
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 1.6e-137 494.2 675 53.0
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 6.0e-137 492.3 531 53.7
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.8e-136 490.7 531 53.7
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 2.5e-135 486.9 507 54.6
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 7.4e-135 485.3 526 53.0
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 6.2e-134 482.3 576 54.3
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 2.4e-133 480.3 512 53.3
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 3.8e-131 473.0 674 51.9
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.1e-127 461.5 422 57.3
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 4.8e-126 456.1 581 51.3
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.1e-125 454.9 535 48.4
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.5e-124 451.1 647 44.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 3.8e-123 446.4 507 50.1
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.3e-120 437.2 576 53.3
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 5.1e-120 436.0 516 51.4
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 5.1e-120 436.0 516 51.4
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 1.9e-119 434.1 526 50.2
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.7e-119 432.6 693 42.9
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 3.6e-113 413.3 653 41.5
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.4e-108 396.7 587 49.9
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 6.5e-99 365.9 517 45.1
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 3.6e-97 360.1 387 50.4
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 5.2e-96 356.3 408 50.5
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 9.7e-95 352.1 522 42.7
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 5.5e-90 336.3 690 40.3
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.0e-88 332.0 616 40.9
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.1e-82 312.0 370 47.0
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.8e-72 276.2 306 52.3
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.7e-60 237.7 220 57.7
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.3e-58 230.7 510 34.3
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.1e-56 225.7 561 32.6
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 7.8e-44 183.0 231 45.5
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 3.1e-32 144.4 361 31.6
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.2e-31 142.5 577 26.9
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 4.2e-21 107.5 167 43.7
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.1e-12 78.6 188 52.1
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.1e-08 66.2 51 56.9
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.8e-08 65.5 90 38.9
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 1.5e-07 62.4 98 36.7


User provided reference genes

Program Settings