Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28878 Striga asiatica HOM05D006557 ORTHO05D008177 1.9e-150 535.8 264 100.0
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 8.6e-71 271.2 190 72.6
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 7.3e-70 268.1 190 73.2
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 2.6e-67 259.6 185 70.8
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 4.4e-67 258.8 186 71.0
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 3.2e-65 252.7 191 68.6
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 2.0e-64 250.0 189 67.7
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 6.0e-64 248.4 189 68.3
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 6.0e-64 248.4 189 68.3
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.7e-63 246.9 191 66.5
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 8.6e-63 244.6 183 69.4
Dinv43750 Davidia involucrata HOM05D006557 ORTHO05D008177 8.6e-63 244.6 184 67.4
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 1.5e-62 243.8 193 64.2
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 1.9e-62 243.4 182 67.0
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.9e-62 243.4 191 64.9
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 3.3e-62 242.7 185 68.1
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 4.3e-62 242.3 185 67.0
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 5.6e-62 241.9 185 67.0
MD02G1195100 Malus domestica HOM05D006557 ORTHO05D008177 5.6e-62 241.9 193 64.8
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.2e-61 240.7 191 65.4
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.2e-61 240.7 191 64.9
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 1.2e-61 240.7 186 66.1
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 1.6e-61 240.4 191 64.9
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 1.6e-61 240.4 183 66.1
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 1.6e-61 240.4 181 69.1
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 2.1e-61 240.0 191 64.9
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 1.1e-60 237.7 185 66.5
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 1.8e-60 236.9 186 66.1
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 3.1e-60 236.1 185 68.1
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 4.0e-60 235.7 185 65.9
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 4.0e-60 235.7 185 65.9
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 8.9e-60 234.6 184 65.8
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 8.9e-60 234.6 190 64.2
CAN.G170.58 Capsicum annuum HOM05D006557 ORTHO05D008177 1.2e-59 234.2 185 64.3
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 1.2e-59 234.2 183 65.6
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 2.6e-59 233.0 192 63.5
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 3.4e-59 232.6 183 66.7
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 4.4e-59 232.3 185 64.3
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 4.4e-59 232.3 184 64.1
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 5.8e-59 231.9 185 64.3
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 7.5e-59 231.5 185 63.8
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 7.5e-59 231.5 181 67.4
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 9.8e-59 231.1 185 63.2
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 9.8e-59 231.1 190 63.7
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 1.3e-58 230.7 184 65.8
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.3e-58 230.7 233 54.9
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 1.7e-58 230.3 183 65.0
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 1.7e-58 230.3 185 62.7
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 2.2e-58 229.9 184 64.1
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 4.9e-58 228.8 184 64.7
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 4.9e-58 228.8 184 62.5
VMungo1383G0754 Vigna mungo HOM05D006557 ORTHO05D008177 4.9e-58 228.8 185 62.7
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 6.4e-58 228.4 184 64.7
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 6.4e-58 228.4 189 64.6
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 6.4e-58 228.4 186 62.9
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 6.4e-58 228.4 184 62.5
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 8.3e-58 228.0 185 63.2
Haze_15236 Corylus avellana HOM05D006557 ORTHO05D008177 1.9e-57 226.9 151 73.5
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 1.9e-57 226.9 185 63.2
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 2.4e-57 226.5 184 63.6
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 3.2e-57 226.1 182 62.6
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 5.4e-57 225.3 190 61.1
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 5.4e-57 225.3 183 63.4
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 7.1e-57 224.9 188 59.6
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 7.1e-57 224.9 186 62.4
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 9.2e-57 224.6 189 61.9
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 1.2e-56 224.2 190 59.5
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 1.6e-56 223.8 190 57.4
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 2.1e-56 223.4 181 61.3
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 4.6e-56 222.2 192 61.5
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 1.7e-55 220.3 182 61.5
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 5.1e-55 218.8 184 62.5
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 5.1e-55 218.8 191 61.3
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 5.1e-55 218.8 186 61.8
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 6.6e-55 218.4 188 58.0
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 1.1e-54 217.6 186 59.7
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 1.9e-54 216.9 185 61.6
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 2.5e-54 216.5 184 58.7
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 1.6e-53 213.8 190 58.9
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 2.8e-53 213.0 228 52.6
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 3.6e-53 212.6 190 57.9
AT1G01920 Arabidopsis thaliana HOM05D006557 ORTHO05D008177 4.7e-53 212.2 191 60.2
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 1.1e-52 211.1 186 60.8
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 3.7e-50 202.6 185 57.8
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 7.1e-49 198.4 195 57.4
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 7.1e-49 198.4 195 57.4
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 2.1e-48 196.8 195 52.3
CDE11G1252 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 8.6e-47 191.4 162 56.8
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 1.2e-45 187.6 196 54.1
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 1.6e-45 187.2 185 54.6
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 8.1e-45 184.9 193 55.4
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 8.9e-44 181.4 132 68.9
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 3.4e-43 179.5 192 53.1
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 1.6e-40 170.6 130 66.2
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 1.0e-39 167.9 94 83.0
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 7.6e-35 151.8 188 44.1
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 3.0e-31 139.8 183 43.7
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 4.0e-28 129.4 186 43.5
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 1.3e-26 124.4 162 43.2
CBR_g54105 Chara braunii HOM05D006557 ORTHO05D008177 6.5e-18 95.5 119 40.3
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 3.3e-14 83.2 70 61.4
Cre07.g321200 Chlamydomonas reinhardtii HOM05D006557 ORTHO05D008177 1.6e-08 64.3 91 39.6
PGR119G0095 Punica granatum HOM05D005456 ORTHO05D006805 1.3e-07 61.2 115 33.0
MCO01G414 Micromonas commoda HOM05D004224 ORTHO05D048806 3.3e-06 56.6 109 31.2


User provided reference genes

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