Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28877 Striga asiatica HOM05D008009 ORTHO05D010177 1.4e-140 503.1 269 100.0
MSTRG.17230 Avicennia marina HOM05D008009 ORTHO05D010177 1.0e-103 380.6 253 79.4
SalBow3G1346 Salvia bowleyana HOM05D008009 ORTHO05D010177 8.7e-103 377.5 255 75.7
Migut.B01680 Erythranthe guttata HOM05D008009 ORTHO05D010177 2.1e-101 372.9 258 74.8
CAN.G170.56 Capsicum annuum HOM05D008009 ORTHO05D010177 4.2e-97 358.6 259 72.2
PGSC0003DMG400000002 Solanum tuberosum HOM05D008009 ORTHO05D010177 1.8e-95 353.2 247 73.7
Peaxi162Scf00021g00312 Petunia axillaris HOM05D008009 ORTHO05D010177 6.7e-95 351.3 244 73.8
Solyc01g091850.3 Solanum lycopersicum HOM05D008009 ORTHO05D010177 1.5e-94 350.1 255 71.8
Sopen01g037620 Solanum pennellii HOM05D008009 ORTHO05D010177 1.5e-94 350.1 257 70.8
ECA236G3590 Erigeron canadensis HOM05D008009 ORTHO05D010177 6.2e-93 344.7 261 70.1
Cc02_g37180 Coffea canephora HOM05D008009 ORTHO05D010177 1.1e-92 344.0 264 68.6
DCAR_006901 Daucus carota HOM05D008009 ORTHO05D010177 4.5e-91 338.6 266 67.7
unitig_0.g1290 Utricularia gibba HOM05D008009 ORTHO05D010177 2.4e-89 332.8 254 69.7
Lsat_1_v5_gn_7_8101 Lactuca sativa HOM05D008009 ORTHO05D010177 4.2e-89 332.0 236 73.3
FAN01G0151 Fragaria x ananassa HOM05D008009 ORTHO05D010177 9.3e-89 330.9 242 68.2
HanXRQChr06g0169381 Helianthus annuus HOM05D008009 ORTHO05D010177 9.3e-89 330.9 251 70.5
FAN06G2831 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.6e-88 330.1 242 68.6
QL08p050750 Quercus lobata HOM05D008009 ORTHO05D010177 1.6e-88 330.1 237 70.9
Potri.014G077600 Populus trichocarpa HOM05D008009 ORTHO05D010177 2.1e-88 329.7 245 68.2
FvH4_7g12940 Fragaria vesca HOM05D008009 ORTHO05D010177 2.7e-88 329.3 242 68.6
FAN06G1824 Fragaria x ananassa HOM05D008009 ORTHO05D010177 4.6e-88 328.6 242 68.2
FAN10G4026 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.0e-87 327.4 242 67.8
RcHm_v2.0_Chr1g0352071 Rosa chinensis HOM05D008009 ORTHO05D010177 3.9e-87 325.5 235 69.4
GSVIVG01027596001 Vitis vinifera HOM05D008009 ORTHO05D010177 5.1e-87 325.1 243 69.1
Eucgr.E00219 Eucalyptus grandis HOM05D008009 ORTHO05D010177 3.3e-86 322.4 245 67.3
Cfa021163 Carpinus fangiana HOM05D008009 ORTHO05D010177 4.3e-86 322.0 247 67.2
Cfa004175 Carpinus fangiana HOM05D008009 ORTHO05D010177 1.3e-85 320.5 247 66.8
Haze_15234 Corylus avellana HOM05D008009 ORTHO05D010177 2.1e-85 319.7 247 66.4
PGR042G1113 Punica granatum HOM05D008009 ORTHO05D010177 2.8e-85 319.3 237 69.6
FAN03G0554 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.8e-84 316.6 246 65.9
CANSAT56G2363 Cannabis sativa HOM05D008009 ORTHO05D010177 9.0e-84 314.3 245 67.8
Atru.chr5.397 Acer truncatum HOM05D008009 ORTHO05D010177 8.4e-82 307.8 242 67.8
Atru.chr5.391 Acer truncatum HOM05D008009 ORTHO05D010177 2.5e-81 306.2 242 67.4
Nitab4.5_0009025g0020 Nicotiana tabacum HOM05D002524 ORTHO05D002718 2.5e-81 306.2 242 69.0
Actinidia27148 Actinidia chinensis HOM05D008009 ORTHO05D010177 3.3e-78 295.8 239 66.1
Nn6g34273 Nelumbo nucifera HOM05D008009 ORTHO05D010177 1.3e-77 293.9 245 62.0
Aqoxy5G03972 Aquilegia oxysepala HOM05D008009 ORTHO05D010177 2.1e-77 293.1 263 60.1
Dinv43752 Davidia involucrata HOM05D008009 ORTHO05D010177 2.1e-77 293.1 236 66.5
arahy.Tifrunner.gnm1.ann1.RW66HN Arachis hypogaea HOM05D008009 ORTHO05D010177 8.2e-77 291.2 236 62.3
FAN10G1597 Fragaria x ananassa HOM05D008009 ORTHO05D010177 3.1e-76 289.3 245 62.4
Glyma.18G228200 Glycine max HOM05D008009 ORTHO05D010177 4.1e-76 288.9 244 61.9
Lj1g0026011 Lotus japonicus HOM05D008009 ORTHO05D010177 4.1e-76 288.9 241 61.8
Medtr7g076320 Medicago truncatula HOM05D008009 ORTHO05D010177 5.3e-76 288.5 241 61.0
Psat3g112360 Pisum sativum HOM05D008009 ORTHO05D010177 1.2e-75 287.3 242 61.2
VMungo1383G2711 Vigna mungo HOM05D008009 ORTHO05D010177 4.5e-75 285.4 243 59.7
Phvul.008G070000 Phaseolus vulgaris HOM05D008009 ORTHO05D010177 5.9e-75 285.0 243 60.1
Nitab4.5_0006706g0010 Nicotiana tabacum HOM05D008009 ORTHO05D010177 1.0e-74 284.3 259 61.4
Ca_07869_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 2.2e-74 283.1 236 62.3
Ca_29748_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 2.2e-74 283.1 236 62.3
SEGI_40209 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 5.5e-73 278.5 239 59.4
Prupe.2G153700 Prunus persica HOM05D008009 ORTHO05D010177 6.9e-68 261.5 199 67.3
Nitab4.5_0012175g0010 Nicotiana tabacum HOM05D002524 ORTHO05D002718 2.0e-67 260.0 211 64.5
TPR.G37743 Trifolium pratense HOM05D008009 ORTHO05D010177 2.6e-67 259.6 257 55.6
AUR62004286 Chenopodium quinoa HOM05D008009 ORTHO05D010177 1.1e-65 254.2 201 62.2
AUR62033371 Chenopodium quinoa HOM05D008009 ORTHO05D010177 2.5e-65 253.1 201 62.2
EL10Ac1g00970 Beta vulgaris HOM05D008009 ORTHO05D010177 1.6e-64 250.4 242 56.2
Hma1.2p1_0033F.1_g020690 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 1.0e-63 247.7 199 64.8
COL.COLO4_12632 Corchorus olitorius HOM05D008009 ORTHO05D010177 2.8e-61 239.6 244 54.9
Pp3c16_7270 Physcomitrium patens HOM05D008009 ORTHO05D010177 2.8e-61 239.6 233 51.9
Pp3c25_40 Physcomitrium patens HOM05D008009 ORTHO05D010177 3.8e-58 229.2 231 51.1
Gohir.D08G150200 Gossypium hirsutum HOM05D008009 ORTHO05D010177 2.7e-56 223.0 249 49.0
Gorai.004G156000 Gossypium raimondii HOM05D008009 ORTHO05D010177 2.7e-56 223.0 249 49.0
Mapoly0089s0055 Marchantia polymorpha HOM05D008009 ORTHO05D010177 7.4e-54 214.9 244 45.5
Ah.05g175960 Amaranthus hybridus HOM05D008009 ORTHO05D010177 9.1e-52 208.0 194 57.7
arahy.Tifrunner.gnm1.ann1.EX28FW Arachis hypogaea HOM05D008009 ORTHO05D010177 2.2e-50 203.4 180 55.0
Gohir.A08G129000 Gossypium hirsutum HOM05D008009 ORTHO05D010177 1.1e-49 201.1 249 44.6
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 5.7e-46 188.7 227 41.4
CiPaw.01G052300 Carya illinoinensis HOM05D008009 ORTHO05D010177 9.1e-44 181.4 233 48.9
Duzib133G0776 Durio zibethinus HOM05D008009 ORTHO05D010177 1.2e-43 181.0 176 54.5
Nn4g22699 Nelumbo nucifera HOM05D008009 ORTHO05D010177 7.7e-35 151.8 129 58.1
MBI12_g11808_MAGBIO Magnolia biondii HOM05D008009 ORTHO05D010177 3.8e-34 149.4 121 69.4
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 5.7e-30 135.6 229 33.2
Thecc.01G369500 Theobroma cacao HOM05D008009 ORTHO05D010177 1.7e-26 124.0 246 39.4
SEGI_11444 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 2.3e-15 87.0 79 51.9
PRCOL_00004744 Prasinoderma coloniale HOM05D008009 ORTHO05D004370 5.8e-14 82.4 215 27.0
Hma1.2p1_0033F.1_g020670 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 5.4e-12 75.9 44 86.4
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 7.8e-11 72.0 237 25.7
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 1.0e-10 71.6 239 28.0
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 1.3e-10 71.2 246 27.2
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 1.7e-10 70.9 239 27.2
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 5.0e-10 69.3 234 26.5
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 5.0e-10 69.3 248 26.6
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 1.1e-09 68.2 217 25.8
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 1.5e-09 67.8 239 27.2
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 1.5e-09 67.8 239 27.2
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 1.9e-09 67.4 239 25.5
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.9e-09 67.4 241 26.1
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 1.9e-09 67.4 224 26.3
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 1.9e-09 67.4 237 25.3
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 3.3e-09 66.6 224 25.0
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 3.3e-09 66.6 218 26.6
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 3.3e-09 66.6 236 25.4
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 4.3e-09 66.2 217 24.9
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 7.3e-09 65.5 234 25.6
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 1.2e-08 64.7 233 24.0
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 1.2e-08 64.7 218 27.1
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 1.2e-08 64.7 239 24.7
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 1.6e-08 64.3 236 25.0
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 1.6e-08 64.3 255 23.5
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.6e-08 64.3 217 24.4
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 2.8e-08 63.5 217 24.0
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 3.6e-08 63.2 234 25.6
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 3.6e-08 63.2 245 27.8
COL.COLO4_19769 Corchorus olitorius HOM05D000981 ORTHO05D000845 6.2e-08 62.4 223 22.9
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 8.1e-08 62.0 234 25.6
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-07 61.6 239 25.5
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-07 61.6 239 25.5
Pp3c20_1770 Physcomitrium patens HOM05D000981 ORTHO05D000845 1.1e-07 61.6 236 27.1
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 1.1e-07 61.6 223 26.0
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 1.8e-07 60.8 242 26.0
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.8e-07 60.8 222 23.9
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 2.3e-07 60.5 240 23.3
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 3.1e-07 60.1 218 24.3
SMO347G0454 Selaginella moellendorffii HOM05D002473 ORTHO05D002666 3.1e-07 60.1 222 24.3
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 5.2e-07 59.3 221 25.3
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 6.8e-07 58.9 217 22.6
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 6.8e-07 58.9 244 24.2
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 1.2e-06 58.2 236 24.2
HanXRQChr15g0484141 Helianthus annuus HOM05D000981 ORTHO05D000845 2.0e-06 57.4 225 23.6
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 2.6e-06 57.0 218 23.9
Gohir.A04G112072 Gossypium hirsutum HOM05D000981 ORTHO05D000845 2.6e-06 57.0 214 25.7
Gohir.D01G011600 Gossypium hirsutum HOM05D000981 ORTHO05D000845 2.6e-06 57.0 237 23.6
Gorai.002G013500 Gossypium raimondii HOM05D000981 ORTHO05D000845 2.6e-06 57.0 237 23.6
Gohir.A04G112084 Gossypium hirsutum HOM05D000981 ORTHO05D000845 3.4e-06 56.6 214 26.2
DCAR_016699 Daucus carota HOM05D000981 ORTHO05D000845 7.5e-06 55.5 277 21.3
Gohir.D04G153000 Gossypium hirsutum HOM05D000981 ORTHO05D000845 7.5e-06 55.5 214 26.2
Gorai.012G139800 Gossypium raimondii HOM05D000981 ORTHO05D000845 7.5e-06 55.5 214 26.2


User provided reference genes

Program Settings