Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 3.0e-69 265.4 168 100.0
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 2.1e-22 109.8 181 43.6
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 4.0e-21 105.5 179 43.6
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.8e-18 96.7 173 41.6
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.4e-18 96.3 177 50.3
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 3.5e-17 92.4 173 41.0
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 7.7e-17 91.3 162 41.4
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.7e-16 90.1 164 39.6
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 3.8e-16 89.0 175 38.3
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.0e-16 88.6 175 37.7
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 5.0e-16 88.6 176 44.9
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 6.6e-16 88.2 174 39.7
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.9e-15 86.7 175 37.7
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 3.3e-15 85.9 174 38.5
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.6e-15 85.1 168 38.7
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 5.6e-15 85.1 164 39.0
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 5.6e-15 85.1 194 44.3
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 5.6e-15 85.1 175 38.9
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 7.3e-15 84.7 164 39.0
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 7.3e-15 84.7 176 39.8
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 7.3e-15 84.7 175 38.9
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.2e-14 84.0 162 42.6
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.6e-14 83.6 177 36.7
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 1.6e-14 83.6 189 38.6
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.6e-14 83.6 181 51.4
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.1e-14 83.2 175 36.6
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.1e-14 83.2 172 39.0
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 2.1e-14 83.2 170 40.6
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.6e-14 82.4 174 36.2
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 6.1e-14 81.6 170 37.6
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 6.1e-14 81.6 172 35.5
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 8.0e-14 81.3 163 39.3
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.0e-13 80.9 186 36.6
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.4e-13 80.5 172 47.7
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 1.4e-13 80.5 175 38.3
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 1.4e-13 80.5 171 38.0
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 2.3e-13 79.7 170 40.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 2.3e-13 79.7 169 39.6
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 3.0e-13 79.3 174 40.2
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 5.2e-13 78.6 171 42.7
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 5.2e-13 78.6 177 36.2
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 5.2e-13 78.6 180 37.2
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 6.8e-13 78.2 183 51.9
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 6.8e-13 78.2 175 37.1
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 8.9e-13 77.8 169 37.3
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.2e-12 77.4 170 38.2
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.2e-12 77.4 176 36.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.0e-12 76.6 167 36.5
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 2.6e-12 76.3 181 35.9
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 3.4e-12 75.9 160 36.9
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 4.4e-12 75.5 169 34.9
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 5.7e-12 75.1 158 37.3
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 5.7e-12 75.1 175 40.6
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 7.5e-12 74.7 161 36.0
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 7.5e-12 74.7 168 36.3
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.3e-11 73.9 162 35.2
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.3e-11 73.9 179 39.1
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.3e-11 73.9 172 41.3
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 1.3e-11 73.9 178 51.1
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 2.2e-11 73.2 179 37.4
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 3.7e-11 72.4 172 34.3
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 4.9e-11 72.0 165 35.2
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 4.9e-11 72.0 175 36.0
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.9e-11 72.0 180 51.1
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 1.8e-10 70.1 176 46.6
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.4e-10 69.7 160 36.2
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 7.0e-10 68.2 162 35.2
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 9.2e-10 67.8 174 35.1
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 4.6e-09 65.5 182 34.1
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 2.3e-08 63.2 164 34.8
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 3.0e-08 62.8 164 34.8
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.0e-08 62.8 70 52.9
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 5.0e-08 62.0 85 43.5
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 1.1e-07 60.8 169 36.1
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.1e-07 60.8 169 36.1
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.1e-07 60.8 148 33.8
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.1e-07 60.8 190 36.8
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.5e-07 60.5 191 36.6
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 2.5e-07 59.7 153 32.0
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 3.3e-07 59.3 195 35.4
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 3.3e-07 59.3 160 32.5
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 9.5e-07 57.8 175 39.4
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.2e-06 57.4 172 33.7
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 3.6e-06 55.8 162 32.1


User provided reference genes

Program Settings