Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 2.5e-203 711.8 342 100.0
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 4.1e-134 481.9 352 71.9
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 6.6e-132 474.6 345 72.5
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 9.9e-128 460.7 341 68.3
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.9e-128 460.7 341 68.3
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.9e-128 460.7 341 68.3
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.2e-127 459.5 341 68.3
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.2e-127 459.5 341 68.3
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.8e-127 458.8 308 74.7
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.9e-127 458.4 341 67.7
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.1e-126 457.2 352 65.9
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.4e-126 456.8 309 74.1
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.4e-126 456.8 351 66.4
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 3.2e-126 455.7 331 70.1
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 5.4e-126 454.9 350 67.1
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 7.1e-126 454.5 334 69.2
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.2e-125 453.8 338 68.6
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.6e-125 453.4 306 75.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 2.1e-125 453.0 309 73.1
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.7e-125 452.6 351 66.4
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.7e-125 452.6 351 66.1
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.7e-125 452.6 331 69.8
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 3.5e-125 452.2 331 71.3
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.6e-125 451.8 319 72.1
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.6e-125 451.8 306 74.8
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.0e-124 450.7 312 72.8
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 1.0e-124 450.7 325 69.8
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.0e-124 450.7 309 73.8
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 1.3e-124 450.3 348 68.1
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 3.0e-124 449.1 342 66.7
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 6.6e-124 448.0 346 67.9
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 6.6e-124 448.0 325 69.2
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 8.7e-124 447.6 338 68.9
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 8.7e-124 447.6 309 72.8
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 8.7e-124 447.6 333 69.4
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 8.7e-124 447.6 344 66.6
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.1e-123 447.2 350 65.4
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 1.1e-123 447.2 347 67.4
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.9e-123 446.4 350 65.4
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 4.3e-123 445.3 348 67.2
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 5.6e-123 444.9 333 67.3
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 7.3e-123 444.5 343 67.6
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.6e-122 443.4 351 66.1
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.6e-122 442.2 351 65.8
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 4.8e-122 441.8 357 65.0
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 6.2e-122 441.4 318 68.9
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 1.1e-121 440.7 352 65.9
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.8e-121 439.9 337 66.8
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.8e-121 439.9 342 67.0
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.8e-121 439.9 336 67.9
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 2.4e-121 439.5 350 64.6
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 3.1e-121 439.1 322 68.0
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 5.3e-121 438.3 346 65.9
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 5.3e-121 438.3 329 68.1
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 5.3e-121 438.3 356 64.3
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 2.6e-120 436.0 345 66.4
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 4.5e-120 435.3 313 68.7
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 5.8e-120 434.9 352 65.6
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 7.6e-120 434.5 329 67.2
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.3e-119 433.7 328 68.0
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.7e-119 433.3 344 63.1
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 2.9e-119 432.6 329 67.5
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 2.9e-119 432.6 307 70.4
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 4.9e-119 431.8 313 68.4
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 6.4e-119 431.4 349 65.0
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 6.4e-119 431.4 337 65.6
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.1e-118 430.6 334 66.2
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 5.4e-118 428.3 328 66.8
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 5.4e-118 428.3 318 68.6
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.2e-117 427.2 328 67.1
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.6e-117 426.8 321 68.2
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 2.1e-117 426.4 339 66.7
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 2.7e-117 426.0 328 66.8
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 2.7e-117 426.0 328 66.8
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 1.8e-116 423.3 328 65.5
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 5.1e-116 421.8 340 65.6
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.3e-114 417.2 341 63.6
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 2.4e-113 412.9 299 68.2
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 6.4e-111 404.8 390 58.2
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 3.7e-106 389.0 303 68.3
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 2.7e-101 372.9 309 64.7
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.9e-99 366.7 306 63.4
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.1e-97 360.9 261 68.6
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.8e-97 360.1 252 72.2
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.7e-95 353.6 274 66.8
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 2.9e-95 352.8 294 63.9
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.4e-94 350.5 304 58.2
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.4e-94 350.5 187 86.1
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.9e-94 350.1 292 62.3
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 7.2e-94 348.2 345 53.6
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.2e-93 347.4 297 59.9
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.2e-93 347.4 252 69.4
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 8.8e-92 341.3 187 84.0
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 2.5e-91 339.7 296 55.4
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.5e-91 339.7 182 84.1
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.3e-91 339.0 245 68.2
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 5.3e-89 332.0 303 55.1
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 1.4e-86 323.9 295 55.6
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.3e-82 310.8 279 60.9
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.4e-80 302.8 264 61.0
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 6.5e-79 298.5 257 61.9
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.0e-76 291.2 252 61.1
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 2.3e-55 220.3 310 43.2
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.8e-53 213.4 224 53.6
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 4.7e-53 212.6 301 41.2
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.3e-47 193.7 180 55.6
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 3.6e-45 186.4 316 38.0
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 2.0e-40 170.6 198 50.5
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-39 167.9 295 40.0
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.3e-34 151.4 147 59.9
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 1.5e-30 137.9 189 47.6
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 6.2e-29 132.5 280 31.4
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.9e-26 123.6 111 57.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.1e-25 121.7 283 33.2
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.1e-25 121.7 123 55.3
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.9e-25 120.9 189 37.6
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 8.6e-23 112.1 68 72.1
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.9e-18 97.1 157 42.7
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 7.1e-17 92.4 202 39.1
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.5e-14 84.7 81 56.8
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.7e-10 71.2 43 72.1
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.2e-10 70.9 69 55.1


User provided reference genes

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