Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 2.2e-55 218.8 115 100.0
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 2.8e-26 122.1 115 55.7
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 5.9e-24 114.4 113 52.2
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 1.1e-22 110.2 113 54.0
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 3.2e-22 108.6 114 52.6
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 3.0e-20 102.1 113 48.7
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 9.7e-19 97.1 111 46.8
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 1.3e-18 96.7 113 46.9
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 2.2e-18 95.9 112 48.2
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 2.8e-18 95.5 117 47.0
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 2.8e-18 95.5 113 46.9
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 6.3e-18 94.4 111 45.0
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 2.4e-17 92.4 111 45.0
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 2.4e-17 92.4 110 45.5
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 3.1e-17 92.0 115 48.7
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 4.1e-17 91.7 125 44.8
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 5.3e-17 91.3 112 49.1
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.5e-16 89.7 114 43.9
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 3.4e-16 88.6 115 47.8
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 1.7e-15 86.3 108 44.4
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 6.5e-15 84.3 115 43.5
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 1.4e-14 83.2 115 41.7
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 1.4e-14 83.2 107 42.1
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 3.2e-14 82.0 106 42.5
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 7.2e-14 80.9 115 40.9
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 1.2e-13 80.1 113 41.6
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.6e-13 79.7 104 40.4
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 2.1e-13 79.3 114 45.6
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 7.9e-13 77.4 113 35.4
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.0e-12 77.0 104 39.4
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 1.0e-12 77.0 104 39.4
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 1.4e-12 76.6 102 41.2
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 2.3e-12 75.9 128 35.9
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 2.3e-12 75.9 112 37.5
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 8.8e-12 73.9 108 36.1
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 8.8e-12 73.9 111 41.4
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 1.5e-11 73.2 113 41.6
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 2.0e-11 72.8 109 41.3
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 2.5e-11 72.4 105 37.1
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 7.4e-11 70.9 109 37.6
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 2.2e-10 69.3 111 39.6
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 3.7e-10 68.6 100 43.0
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 4.8e-10 68.2 106 34.0
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.1e-09 67.0 95 42.1
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 2.4e-09 65.9 97 36.1
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 3.1e-09 65.5 114 39.5
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.2e-08 63.5 96 39.6
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 1.2e-08 63.5 94 40.4
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 1.2e-08 63.5 111 36.0
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 2.6e-08 62.4 94 39.4
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 1.0e-07 60.5 99 34.3
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 2.2e-07 59.3 153 27.5
ECA233G4326 Erigeron canadensis HOM05D008446 ORTHO05D010616 2.9e-07 58.9 123 37.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 9.4e-06 53.9 113 36.3


User provided reference genes

Program Settings