Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 2.1e-71 272.3 142 100.0
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 4.4e-37 158.3 144 63.9
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 3.5e-34 148.7 144 60.4
SGA_v2.0_scaffold144G35939 Striga asiatica HOM05D000509 ORTHO05D006393 1.2e-26 123.6 81 85.2
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 6.5e-25 117.9 136 50.7
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 3.2e-24 115.5 144 52.8
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.6e-23 113.2 141 49.6
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 4.7e-23 111.7 143 47.6
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.0e-22 109.0 137 50.4
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 4.0e-22 108.6 138 46.4
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 5.2e-22 108.2 143 49.7
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.2e-21 107.1 130 50.8
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 4.4e-21 105.1 141 48.9
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 1.7e-20 103.2 140 47.1
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.7e-20 103.2 152 48.0
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 2.2e-20 102.8 150 47.3
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 2.8e-20 102.4 122 45.9
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 1.1e-19 100.5 132 47.7
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 1.1e-19 100.5 137 42.3
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.4e-19 100.1 136 43.4
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 1.8e-19 99.8 138 42.8
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 2.4e-19 99.4 139 48.2
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 4.1e-19 98.6 136 44.1
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 4.1e-19 98.6 136 47.8
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 4.1e-19 98.6 140 46.4
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 5.4e-19 98.2 126 46.0
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 1.2e-18 97.1 137 46.7
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 2.7e-18 95.9 136 42.6
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 2.7e-18 95.9 137 47.4
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 2.7e-18 95.9 134 42.5
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.5e-18 95.5 135 40.7
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 3.5e-18 95.5 144 43.1
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 4.5e-18 95.1 141 43.3
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 5.9e-18 94.7 137 45.3
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 5.9e-18 94.7 141 44.7
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.0e-17 94.0 138 41.3
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.7e-17 93.2 134 43.3
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.7e-17 93.2 138 41.3
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 2.3e-17 92.8 137 40.9
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 5.0e-17 91.7 139 42.4
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 5.0e-17 91.7 143 44.1
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 6.5e-17 91.3 142 45.8
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 6.5e-17 91.3 137 41.6
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.5e-16 90.1 127 43.3
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.5e-16 90.1 136 47.8
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 2.5e-16 89.4 117 41.9
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 3.3e-16 89.0 126 45.2
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 3.3e-16 89.0 96 52.1
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 3.3e-16 89.0 138 40.6
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 7.2e-16 87.8 147 42.9
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 9.5e-16 87.4 147 43.5
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.2e-15 87.0 138 45.7
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.6e-15 86.7 116 45.7
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 2.8e-15 85.9 137 42.3
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.6e-15 85.5 136 36.8
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.6e-15 85.5 136 36.8
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 3.6e-15 85.5 138 39.1
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 4.7e-15 85.1 144 42.4
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 4.7e-15 85.1 123 40.7
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 6.1e-15 84.7 137 41.6
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.1e-15 84.7 120 45.8
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 8.0e-15 84.3 144 41.7
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 8.0e-15 84.3 137 38.0
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.0e-14 84.0 141 36.2
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.0e-14 84.0 142 41.5
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 1.0e-14 84.0 136 43.4
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 2.3e-14 82.8 136 39.7
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.0e-14 82.4 136 41.2
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 6.8e-14 81.3 145 44.1
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.9e-14 80.9 126 43.7
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 8.9e-14 80.9 123 44.7
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-13 80.5 126 42.9
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-13 80.5 126 42.9
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 1.2e-13 80.5 124 42.7
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.2e-13 80.5 135 41.5
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 2.0e-13 79.7 125 40.8
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 3.4e-13 79.0 138 35.5
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 9.8e-13 77.4 101 49.5
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 1.3e-12 77.0 139 37.4
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.7e-12 76.6 137 36.5
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 2.2e-12 76.3 131 40.5
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 2.2e-12 76.3 115 42.6
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.8e-12 75.9 149 38.3
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 1.1e-11 73.9 138 38.4
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.1e-11 73.9 116 44.8
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 1.1e-11 73.9 137 34.3
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.4e-11 73.6 140 34.3
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 9.2e-11 70.9 157 35.7
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.2e-10 70.5 102 46.1
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 7.8e-10 67.8 127 34.6
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 7.8e-10 67.8 104 45.2
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 1.7e-09 66.6 139 36.0
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 2.3e-09 66.2 78 50.0
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.9e-09 65.9 109 40.4
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 2.9e-09 65.9 103 40.8
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 5.0e-09 65.1 108 41.7
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.6e-09 64.3 122 36.9
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 8.6e-09 64.3 85 48.2
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 1.5e-08 63.5 86 38.4
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 1.5e-08 63.5 125 39.2
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.5e-08 63.5 140 38.6
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.9e-08 63.2 112 36.6
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 1.9e-08 63.2 90 37.8
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 1.9e-08 63.2 87 44.8
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 3.3e-08 62.4 86 39.5
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 3.3e-08 62.4 70 48.6
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 5.6e-08 61.6 107 36.4
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 5.6e-08 61.6 86 39.5
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 5.6e-08 61.6 102 43.1
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 9.5e-08 60.8 96 39.6
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 1.6e-07 60.1 89 40.4
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 1.6e-07 60.1 89 40.4
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 2.1e-07 59.7 86 39.5
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 3.6e-07 58.9 141 34.8
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 1.0e-06 57.4 150 34.0
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 1.4e-06 57.0 122 32.0
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 5.2e-06 55.1 93 41.9
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 6.8e-06 54.7 102 37.3
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 8.9e-06 54.3 131 32.8
Sc09g0004100 Simmondsia chinensis HOM05D000509 ORTHO05D006393 8.9e-06 54.3 94 37.2


User provided reference genes

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