Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 7.3e-74 280.4 137 100.0
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.4e-48 196.4 269 45.7
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 3.1e-48 195.3 269 44.6
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 3.1e-48 195.3 269 45.4
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 4.1e-48 194.9 270 44.8
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 6.9e-48 194.1 271 44.6
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 2.0e-47 192.6 269 44.6
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 2.6e-47 192.2 269 43.9
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 4.5e-47 191.4 269 44.2
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 4.5e-47 191.4 269 44.2
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 5.9e-47 191.0 271 43.5
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 1.3e-46 189.9 269 44.2
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 1.3e-46 189.9 269 44.6
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.3e-46 189.9 269 44.2
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 1.7e-46 189.5 269 44.6
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 2.2e-46 189.1 269 43.5
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 2.2e-46 189.1 269 44.6
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 2.9e-46 188.7 269 43.9
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 2.9e-46 188.7 269 44.2
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 2.9e-46 188.7 239 46.0
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 8.5e-46 187.2 268 44.0
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.1e-45 186.8 271 43.2
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 1.4e-45 186.4 269 42.8
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 1.4e-45 186.4 269 42.8
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 1.9e-45 186.0 269 42.4
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 2.5e-45 185.7 269 42.8
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 3.2e-45 185.3 271 42.4
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 5.5e-45 184.5 269 42.0
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 5.5e-45 184.5 269 42.0
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 5.5e-45 184.5 274 42.0
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 5.5e-45 184.5 269 43.1
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 7.2e-45 184.1 269 43.5
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 7.2e-45 184.1 266 43.2
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 1.6e-44 183.0 269 42.4
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 1.6e-44 183.0 269 41.6
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-44 183.0 269 41.6
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 1.6e-44 183.0 269 43.5
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 2.1e-44 182.6 269 42.0
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 2.7e-44 182.2 269 42.0
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 2.7e-44 182.2 269 42.8
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 3.6e-44 181.8 270 42.6
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.6e-44 181.8 269 41.3
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 4.6e-44 181.4 269 42.4
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 6.1e-44 181.0 270 41.5
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 6.1e-44 181.0 269 42.4
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 6.1e-44 181.0 269 41.6
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 6.1e-44 181.0 268 42.5
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.9e-44 180.6 275 40.7
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.0e-43 180.3 275 40.7
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 42.0
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 41.3
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 40.9
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 42.4
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-43 179.9 275 40.4
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 41.3
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 1.4e-43 179.9 269 41.3
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 40.9
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 41.3
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 41.6
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 40.9
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 42.0
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 1.8e-43 179.5 269 40.5
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 3.9e-43 178.3 260 41.2
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 3.9e-43 178.3 270 41.5
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 3.9e-43 178.3 270 41.5
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.9e-43 178.3 269 42.4
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 5.1e-43 177.9 286 39.2
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 5.1e-43 177.9 269 41.3
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 5.1e-43 177.9 269 41.6
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 6.7e-43 177.6 269 42.0
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 8.8e-43 177.2 269 42.0
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 1.5e-42 176.4 269 40.9
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 1.5e-42 176.4 270 41.1
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 1.5e-42 176.4 269 41.3
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-42 176.4 269 40.1
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.0e-42 176.0 269 42.0
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 2.0e-42 176.0 269 42.0
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.3e-42 175.3 269 41.6
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 3.3e-42 175.3 268 42.2
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 3.3e-42 175.3 270 42.2
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 4.3e-42 174.9 267 41.6
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 4.3e-42 174.9 269 41.6
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 7.4e-42 174.1 269 40.1
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.3e-41 173.3 269 41.6
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 1.7e-41 172.9 269 41.3
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 1.7e-41 172.9 269 41.3
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 2.2e-41 172.6 263 41.4
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 2.8e-41 172.2 265 39.6
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 3.7e-41 171.8 269 41.3
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.3e-41 171.0 269 40.9
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 6.3e-41 171.0 269 40.5
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 1.4e-40 169.9 265 40.4
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 2.4e-40 169.1 269 39.4
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 2.4e-40 169.1 267 39.7
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 4.1e-40 168.3 269 41.6
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.1e-40 168.3 271 39.9
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 6.9e-40 167.5 281 38.1
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 6.9e-40 167.5 306 37.9
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 2.0e-39 166.0 271 39.5
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 2.6e-39 165.6 268 38.8
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 5.9e-39 164.5 269 38.7
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.7e-39 164.1 271 39.1
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 7.7e-39 164.1 269 39.4
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.0e-38 163.7 254 41.3
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 1.0e-38 163.7 269 37.5
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 1.3e-38 163.3 269 38.7
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 2.9e-38 162.2 269 38.3
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 3.8e-38 161.8 269 38.7
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 6.5e-38 161.0 269 38.3
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 8.5e-38 160.6 267 37.8
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.4e-37 159.8 269 40.5
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 2.5e-37 159.1 268 38.1
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 7.2e-37 157.5 269 37.9
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 9.4e-37 157.1 269 37.2
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 9.4e-37 157.1 271 37.6
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 1.6e-36 156.4 268 37.3
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 2.1e-36 156.0 272 37.5
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 2.7e-36 155.6 269 38.7
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.7e-36 154.8 272 37.9
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.7e-36 154.8 272 37.9
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 6.1e-36 154.5 271 37.6
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 7.9e-36 154.1 270 37.0
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.0e-35 153.7 271 36.9
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-35 153.3 278 37.1
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-35 153.3 278 37.1
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 3.9e-35 151.8 242 42.6
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.8e-35 150.6 278 36.7
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 1.1e-34 150.2 266 36.8
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 1.5e-34 149.8 242 41.7
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 5.7e-34 147.9 269 36.1
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.8e-33 145.6 270 34.8
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 4.8e-33 144.8 270 35.2
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 8.2e-33 144.1 270 35.2
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.4e-32 143.3 271 35.4
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 1.8e-32 142.9 267 36.0
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 3.1e-32 142.1 250 38.8
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 3.1e-32 142.1 269 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.0e-31 139.4 269 33.5
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.5e-31 138.7 267 34.1
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 3.5e-31 138.7 269 35.7
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 3.8e-30 135.2 80 81.2
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 8.5e-30 134.0 80 81.2
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 2.5e-29 132.5 80 83.8
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 1.2e-28 130.2 80 78.8
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 8.0e-28 127.5 236 35.6
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 5.7e-26 121.3 87 71.3
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 4.8e-25 118.2 295 30.2
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.8e-24 116.3 69 79.7
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.4e-24 115.9 97 61.9
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 7.0e-24 114.4 235 33.6
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 7.0e-24 114.4 249 31.3
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.2e-23 113.6 108 57.4
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.5e-23 112.1 265 30.2
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.2e-22 109.4 108 54.6
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.2e-22 109.4 108 54.6
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 6.5e-22 107.8 108 57.4
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 6.5e-22 107.8 61 83.6
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 1.5e-21 106.7 76 69.7
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 1.9e-21 106.3 114 53.5
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 5.5e-21 104.8 64 78.1
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 1.2e-20 103.6 76 67.1
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 6.1e-20 101.3 68 72.1
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.0e-19 100.5 61 75.4
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 3.0e-19 99.0 115 49.6
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 9.7e-18 94.0 80 65.0
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 7.0e-16 87.8 59 71.2
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 5.7e-10 68.2 92 47.8
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 3.7e-09 65.5 64 51.6
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 4.8e-09 65.1 258 25.2
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 5.4e-08 61.6 75 44.0


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