Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 2.6e-236 821.6 410 100.0
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 3.6e-169 598.6 413 78.0
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 3.8e-150 535.4 413 70.2
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.2e-149 531.9 406 69.7
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 3.5e-148 528.9 406 69.2
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 4.6e-148 528.5 406 69.2
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.8e-147 526.6 406 69.2
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 3.9e-147 525.4 406 69.2
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.1e-146 523.9 407 68.1
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 8.2e-145 517.7 408 68.1
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.1e-144 517.3 408 67.9
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.0e-142 510.8 398 69.1
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 6.5e-142 508.1 408 66.9
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 4.2e-141 505.4 407 66.8
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 9.4e-141 504.2 408 66.4
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 9.4e-141 504.2 407 66.6
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.6e-140 503.4 409 67.2
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.6e-140 501.9 428 65.9
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 4.6e-140 501.9 413 66.3
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.4e-139 500.4 396 68.7
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.8e-139 500.0 428 65.7
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 3.0e-139 499.2 415 67.7
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 5.1e-139 498.4 416 65.9
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.1e-139 498.4 407 66.6
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.1e-138 497.3 417 65.9
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.3e-138 495.4 366 72.7
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 5.7e-138 495.0 369 70.2
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 5.7e-138 495.0 369 70.2
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 9.7e-138 494.2 404 66.3
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.7e-137 493.4 404 67.3
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.1e-136 490.7 399 67.7
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.1e-136 490.7 407 66.1
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.4e-136 490.3 397 68.0
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.8e-136 490.0 400 66.8
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 2.4e-136 489.6 400 66.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.1e-136 489.2 399 67.4
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 3.1e-136 489.2 413 66.8
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 5.3e-136 488.4 412 66.3
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 5.3e-136 488.4 412 66.3
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 6.9e-136 488.0 402 66.2
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 9.1e-136 487.6 420 64.8
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 9.1e-136 487.6 369 71.3
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 1.2e-135 487.3 400 66.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.5e-135 486.9 407 66.6
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.5e-135 486.9 407 66.3
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.6e-135 486.1 413 65.4
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.6e-135 486.1 410 66.6
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.6e-135 486.1 418 64.6
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.6e-135 486.1 375 69.1
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 3.4e-135 485.7 385 69.9
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 4.5e-135 485.3 381 69.6
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 5.9e-135 485.0 411 66.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 5.9e-135 485.0 411 65.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.0e-134 484.2 377 69.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 2.9e-134 482.6 401 66.1
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 2.9e-134 482.6 414 65.2
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.9e-134 482.6 373 69.4
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 3.8e-134 482.3 410 66.1
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 3.8e-134 482.3 410 66.1
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 5.0e-134 481.9 408 65.4
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 5.0e-134 481.9 375 68.5
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.4e-133 480.3 370 70.3
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 4.2e-133 478.8 408 65.9
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 5.5e-133 478.4 369 69.9
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 7.2e-133 478.0 365 69.3
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 7.2e-133 478.0 418 63.9
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 7.2e-133 478.0 369 69.4
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.6e-132 476.9 423 65.0
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 2.1e-132 476.5 414 64.3
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 2.1e-132 476.5 367 70.8
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.7e-132 476.1 406 65.3
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 2.7e-132 476.1 401 64.8
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 3.6e-132 475.7 414 64.7
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.3e-131 473.0 360 71.7
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 6.7e-131 471.5 368 69.3
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 6.7e-131 471.5 409 64.1
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.6e-130 469.5 364 69.2
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 5.7e-130 468.4 413 63.0
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 9.7e-130 467.6 406 63.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 9.7e-130 467.6 428 62.6
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.3e-129 467.2 407 62.7
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 2.2e-129 466.5 421 63.2
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 2.2e-129 466.5 378 66.4
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 3.1e-128 462.6 410 62.9
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.9e-126 456.1 370 67.6
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.8e-126 455.7 384 63.3
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.2e-125 452.2 379 63.9
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 1.2e-124 450.7 399 61.7
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 2.1e-124 449.9 367 66.5
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.7e-124 449.5 375 65.3
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.0e-123 447.6 377 63.9
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 5.2e-123 445.3 375 65.3
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.7e-121 440.3 345 67.8
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.6e-119 433.7 312 74.4
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.0e-119 433.3 324 71.6
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.7e-118 430.3 367 63.8
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 6.5e-118 428.3 359 65.5
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.4e-115 420.6 373 63.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.2e-114 417.5 373 63.3
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 7.5e-114 414.8 319 70.2
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.2e-111 407.5 419 57.0
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.7e-110 403.7 378 57.9
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 2.9e-110 402.9 328 66.8
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 8.5e-110 401.4 402 58.2
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.7e-105 387.1 310 64.5
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 3.8e-102 375.9 366 57.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.0e-99 367.9 267 74.2
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 4.1e-96 355.9 320 57.5
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.9e-89 333.2 352 53.4
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 3.2e-88 329.7 334 56.9
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 6.2e-84 315.5 240 68.3
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 5.1e-78 295.8 294 52.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 3.3e-77 293.1 317 52.1
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.4e-75 287.7 273 61.5
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.2e-74 284.6 312 53.8
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.7e-73 280.8 293 50.9
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 4.3e-69 266.2 251 59.8
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 6.0e-63 245.7 222 60.4
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.3e-62 244.6 235 59.1
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 9.0e-59 231.9 156 76.3
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.9e-56 224.2 191 64.9
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 5.6e-53 212.6 186 65.1
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 5.6e-53 212.6 227 56.8
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 6.2e-52 209.1 186 64.0
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.4e-48 198.0 109 89.0
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 1.0e-46 191.8 237 48.9
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 2.8e-44 183.7 150 67.3
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 5.5e-40 169.5 168 58.9
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.4e-35 154.1 106 69.8
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.1e-27 127.1 282 32.6
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 4.2e-24 116.7 281 28.8
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.2e-23 115.2 190 42.6
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.6e-23 113.6 157 44.6
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 6.1e-23 112.8 77 77.9
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 7.9e-23 112.5 167 38.9
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 9.1e-19 99.0 275 28.7
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-18 98.2 75 68.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.7e-17 94.7 51 88.2
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.9e-16 91.3 88 53.4
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-07 62.0 118 40.7


User provided reference genes

Program Settings