Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 4.7e-183 644.4 332 100.0
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.6e-176 620.9 332 95.8
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 3.0e-174 615.1 327 96.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 9.2e-171 603.6 332 92.5
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.2e-170 603.2 332 92.2
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 2.7e-170 602.1 332 92.2
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 2.7e-170 602.1 332 92.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.5e-170 601.7 332 92.2
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.9e-169 598.2 333 91.6
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.5e-168 595.5 325 92.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 5.6e-168 594.3 329 90.9
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.6e-168 594.3 333 91.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.0e-166 588.2 332 89.5
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.8e-166 587.4 332 89.2
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.0e-165 585.9 332 88.9
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.5e-165 583.9 332 89.8
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.3e-164 583.2 327 89.3
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.2e-164 582.4 332 88.6
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.9e-164 581.3 332 88.6
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-163 580.1 359 83.6
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-163 579.7 332 88.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 5.4e-163 577.8 327 88.1
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 7.0e-163 577.4 327 88.7
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 9.2e-163 577.0 327 88.1
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.0e-162 575.9 327 88.1
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 2.7e-162 575.5 328 88.4
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.6e-162 574.7 325 88.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 7.8e-162 573.9 332 86.7
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.0e-161 573.5 327 86.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-161 573.5 327 87.5
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.3e-161 573.2 327 86.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.3e-161 573.2 327 88.4
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.7e-161 572.8 332 87.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.0e-161 572.0 330 87.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 6.6e-161 570.9 327 86.2
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 8.6e-161 570.5 330 86.7
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 8.6e-161 570.5 330 86.7
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.1e-160 570.1 330 86.7
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.9e-160 569.3 327 86.9
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 4.3e-160 568.2 330 86.7
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 7.3e-160 567.4 327 87.2
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.3e-160 567.4 327 86.2
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.5e-160 567.0 327 86.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-159 566.6 332 85.5
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.2e-159 566.6 330 86.1
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.1e-159 565.8 327 85.6
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.8e-159 565.5 332 85.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.6e-159 565.1 325 88.3
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.6e-159 565.1 325 88.3
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.1e-159 563.9 326 87.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 332 84.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 86.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 2.3e-158 562.4 332 85.2
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 85.5
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-158 561.2 332 86.4
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 325 86.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 3.4e-157 558.5 330 85.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.4e-157 558.5 332 85.5
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 9.9e-157 557.0 332 85.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 9.9e-157 557.0 300 94.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.3e-156 556.6 331 84.9
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.7e-156 555.1 338 84.0
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 84.9
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 84.3
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 2.4e-155 552.4 332 84.0
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 327 85.0
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.2e-154 550.1 330 84.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.2e-154 550.1 332 83.4
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.1e-154 549.3 332 84.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.1e-154 549.3 332 84.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.7e-154 548.9 327 84.1
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 7.8e-154 547.4 327 83.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 7.8e-154 547.4 327 83.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 7.8e-154 547.4 327 83.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 7.8e-154 547.4 327 83.8
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 7.8e-154 547.4 327 83.8
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.7e-153 546.2 327 83.8
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.3e-153 545.8 325 84.3
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.9e-153 545.0 327 83.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 5.1e-153 544.7 327 83.5
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.9e-152 542.7 327 83.2
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.9e-152 542.7 363 78.8
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 7.3e-152 540.8 386 74.4
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.2e-151 540.0 327 82.6
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.7e-151 538.1 331 81.6
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.1e-150 537.0 327 83.5
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.0e-150 535.0 314 84.7
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 8.9e-150 533.9 329 81.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.2e-149 533.5 332 82.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 329 80.9
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.4e-149 531.6 331 81.3
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.8e-149 531.2 327 81.7
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 80.7
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.8e-148 528.5 331 80.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 4.9e-148 528.1 304 86.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 7.1e-147 524.2 455 63.3
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 7.8e-146 520.8 328 81.7
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.0e-145 518.8 338 79.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 7.3e-144 514.2 327 78.6
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.7e-143 511.5 302 87.7
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.4e-142 509.2 330 78.5
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-141 505.0 332 80.1
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.2e-139 498.8 335 75.5
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 5.4e-139 498.0 330 79.7
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.1e-138 496.1 330 76.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 74.9
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.3e-137 493.4 328 79.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 5.3e-134 481.5 332 78.0
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.6e-133 479.2 326 72.7
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.5e-133 478.4 377 68.4
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-132 475.7 332 75.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 3.9e-129 465.3 323 77.4
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.9e-128 463.0 279 82.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.6e-114 416.8 324 63.0
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.9e-113 412.1 233 89.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.5e-112 409.5 318 64.2
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 9.7e-112 407.5 329 63.8
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.8e-108 395.6 234 83.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.3e-100 370.5 272 71.0
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.4e-99 367.1 313 63.3
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-99 367.1 229 82.1
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.8e-97 360.1 335 64.2
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.1e-90 336.7 240 67.9
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 4.7e-90 335.5 197 85.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 5.7e-88 328.6 333 58.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-85 320.9 220 77.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-84 315.8 220 76.4
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.1e-83 314.3 167 95.2
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.7e-82 309.7 165 95.2
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 5.7e-80 302.0 220 74.5
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.5e-75 286.6 334 46.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.8e-70 270.4 165 82.4
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.8e-68 262.7 279 57.3
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 4.7e-66 255.8 327 49.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.0e-61 240.4 135 87.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 4.4e-56 222.6 130 85.4
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.5e-43 180.3 102 85.3
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 6.8e-41 172.2 160 59.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 2.0e-40 170.6 150 58.7
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 3.2e-38 163.3 181 54.1
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-37 160.6 92 89.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.3e-35 153.3 103 74.8
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.8e-34 150.2 89 80.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.5e-32 144.4 88 79.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.6e-32 142.1 77 92.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.2e-31 140.6 69 94.2
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-30 138.3 91 81.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-29 132.9 80 80.0
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.9e-28 129.8 74 85.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-26 122.9 72 80.6
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.2e-26 122.5 75 80.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-23 114.4 72 80.6
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.4e-22 110.5 67 85.1
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 5.4e-22 109.4 69 78.3
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.3e-19 100.1 65 80.0
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 2.8e-10 70.5 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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