Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28731 Striga asiatica HOM05D004886 ORTHO05D005868 1.2e-58 229.6 110 100.0
MSTRG.28124 Avicennia marina HOM05D004886 ORTHO05D005868 1.2e-42 176.4 116 73.3
Hund26556 Selenicereus undatus HOM05D004886 ORTHO05D005868 7.8e-42 173.7 116 69.0
Oeu002885.1 Olea europaea HOM05D004886 ORTHO05D005868 1.7e-41 172.6 116 70.7
Nitab4.5_0001476g0110 Nicotiana tabacum HOM05D004886 ORTHO05D005868 2.3e-41 172.2 116 70.7
SalBow4G2359 Salvia bowleyana HOM05D004886 ORTHO05D005868 2.3e-41 172.2 114 70.2
Nitab4.5_0004264g0010 Nicotiana tabacum HOM05D004886 ORTHO05D005868 5.0e-41 171.0 116 69.8
EL10Ac8g19580 Beta vulgaris HOM05D004886 ORTHO05D005868 6.6e-41 170.6 116 69.0
Peaxi162Scf01124g00012 Petunia axillaris HOM05D004886 ORTHO05D005868 5.6e-40 167.5 114 68.4
Cc02_g25880 Coffea canephora HOM05D004886 ORTHO05D005868 7.3e-40 167.2 116 66.4
unitig_85.g27219 Utricularia gibba HOM05D004886 ORTHO05D005868 7.3e-40 167.2 116 66.4
CAN.G74.36 Capsicum annuum HOM05D004886 ORTHO05D005868 9.5e-40 166.8 116 66.4
Migut.N01703 Erythranthe guttata HOM05D004886 ORTHO05D005868 9.5e-40 166.8 116 69.0
CiPaw.13G020500 Carya illinoinensis HOM05D004886 ORTHO05D005868 1.6e-39 166.0 116 68.1
TWI59G0909 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 1.6e-39 166.0 117 67.5
Ciclev10022551m.g Citrus clementina HOM05D004886 ORTHO05D005868 2.1e-39 165.6 116 66.4
CsaV3_6G006530 Cucumis sativus L. HOM05D004886 ORTHO05D005868 2.1e-39 165.6 116 67.2
Solyc01g088350.4 Solanum lycopersicum HOM05D004886 ORTHO05D005868 2.1e-39 165.6 116 69.0
Sopen01g035180 Solanum pennellii HOM05D004886 ORTHO05D005868 2.1e-39 165.6 116 69.0
MELO3C022467.2 Cucumis melo HOM05D004886 ORTHO05D005868 2.8e-39 165.2 116 66.4
FAN28G1372 Fragaria x ananassa HOM05D004886 ORTHO05D005868 2.8e-39 165.2 112 67.9
FAN19G1058 Fragaria x ananassa HOM05D004886 ORTHO05D005868 3.6e-39 164.9 109 68.8
FAN23G1419 Fragaria x ananassa HOM05D004886 ORTHO05D005868 3.6e-39 164.9 112 67.0
Prupe.2G110500 Prunus persica HOM05D004886 ORTHO05D005868 3.6e-39 164.9 116 64.7
CsaV3_6G004620 Cucumis sativus L. HOM05D004886 ORTHO05D005868 6.2e-39 164.1 113 68.1
FvH4_1g27010 Fragaria vesca HOM05D004886 ORTHO05D005868 8.0e-39 163.7 112 67.0
FAN26G2919 Fragaria x ananassa HOM05D004886 ORTHO05D005868 8.0e-39 163.7 112 67.0
RcHm_v2.0_Chr3g0487321 Rosa chinensis HOM05D004886 ORTHO05D005868 8.0e-39 163.7 112 67.0
CAN.G1480.6 Capsicum annuum HOM05D004886 ORTHO05D005868 1.1e-38 163.3 113 67.3
Gohir.D04G073000 Gossypium hirsutum HOM05D004886 ORTHO05D005868 1.1e-38 163.3 116 65.5
Gorai.012G082000 Gossypium raimondii HOM05D004886 ORTHO05D005868 1.1e-38 163.3 116 65.5
CsaV3_6G021750 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.8e-38 162.5 113 67.3
CsaV3_6G037000 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.8e-38 162.5 113 67.3
Gohir.A05G333500 Gossypium hirsutum HOM05D004886 ORTHO05D005868 1.8e-38 162.5 116 64.7
Psat4g216480 Pisum sativum HOM05D004886 ORTHO05D005868 2.3e-38 162.2 116 68.1
AUR62034033 Chenopodium quinoa HOM05D004886 ORTHO05D005868 3.1e-38 161.8 115 64.3
MD07G1082600 Malus domestica HOM05D004886 ORTHO05D005868 3.1e-38 161.8 116 62.9
Sed0007303 Sechium edule HOM05D004886 ORTHO05D005868 3.1e-38 161.8 116 66.4
Nn1g07674 Nelumbo nucifera HOM05D004886 ORTHO05D005868 4.0e-38 161.4 116 65.5
TPR.G17348 Trifolium pratense HOM05D004886 ORTHO05D005868 4.0e-38 161.4 116 67.2
Atru.chr5.18 Acer truncatum HOM05D004886 ORTHO05D005868 5.2e-38 161.0 116 65.5
Medtr8g009670 Medicago truncatula HOM05D004886 ORTHO05D005868 5.2e-38 161.0 116 69.0
Potri.014G179500 Populus trichocarpa HOM05D004886 ORTHO05D005868 5.2e-38 161.0 116 66.4
PGR044G2350 Punica granatum HOM05D004886 ORTHO05D005868 5.2e-38 161.0 116 65.5
arahy.Tifrunner.gnm1.ann1.FT2T1Y Arachis hypogaea HOM05D004886 ORTHO05D005868 6.8e-38 160.6 121 63.6
Rhsim07G0040800 Rhododendron simsii HOM05D004886 ORTHO05D005868 6.8e-38 160.6 116 67.2
Rhsim07G0041300 Rhododendron simsii HOM05D004886 ORTHO05D005868 6.8e-38 160.6 116 67.2
RhsimUnG0113600 Rhododendron simsii HOM05D004886 ORTHO05D005868 6.8e-38 160.6 116 67.2
COL.COLO4_20817 Corchorus olitorius HOM05D004886 ORTHO05D005868 1.2e-37 159.8 116 65.5
Glyma.03G100700 Glycine max HOM05D004886 ORTHO05D005868 1.2e-37 159.8 116 66.4
Duzib128G0726 Durio zibethinus HOM05D004886 ORTHO05D005868 1.5e-37 159.5 116 65.5
HanXRQChr05g0162431 Helianthus annuus HOM05D004886 ORTHO05D005868 1.5e-37 159.5 116 64.7
Phvul.010G040200 Phaseolus vulgaris HOM05D004886 ORTHO05D005868 2.0e-37 159.1 116 66.4
vmacro13553 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 2.0e-37 159.1 116 66.4
VMungo0331G0020 Vigna mungo HOM05D004886 ORTHO05D005868 2.0e-37 159.1 116 65.5
QL04p024857 Quercus lobata HOM05D004886 ORTHO05D005868 2.6e-37 158.7 115 67.0
CiPaw.14G014400 Carya illinoinensis HOM05D004886 ORTHO05D005868 3.4e-37 158.3 116 62.9
CsaV3_UNG176370 Cucumis sativus L. HOM05D004886 ORTHO05D005868 4.4e-37 157.9 122 63.9
Lj3g0025670 Lotus japonicus HOM05D004886 ORTHO05D005868 4.4e-37 157.9 116 65.5
TWI14G0309 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 4.4e-37 157.9 116 64.7
Lsat_1_v5_gn_6_101400 Lactuca sativa HOM05D004886 ORTHO05D005868 5.8e-37 157.5 116 63.8
Aa31LG1G26120 Aethionema arabicum HOM05D004886 ORTHO05D005868 7.5e-37 157.1 116 61.2
Hma1.2p1_0021F.1_g014430 Hydrangea macrophylla HOM05D004886 ORTHO05D005868 7.5e-37 157.1 113 63.7
SGA_v2.0_scaffold77G25231 Striga asiatica HOM05D000012 ORTHO05D001060 7.5e-37 157.1 170 51.8
Zm00001eb024270 Zea mays HOM05D004886 ORTHO05D005868 9.8e-37 156.8 113 65.5
AL4G43550 Arabidopsis lyrata HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
AT2G44525 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
arahy.Tifrunner.gnm1.ann1.U68WY7 Arachis hypogaea HOM05D004886 ORTHO05D005868 2.2e-36 155.6 121 62.8
BcaC02g12300 Brassica carinata HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
A05p04680 Brassica napus HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
C04p05420 Brassica napus HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
BraA05t19444Z Brassica rapa HOM05D004886 ORTHO05D005868 2.2e-36 155.6 116 61.2
BolC4t22182H Brassica oleracea HOM05D004886 ORTHO05D005868 2.9e-36 155.2 116 61.2
Eucgr.D01136 Eucalyptus grandis HOM05D004886 ORTHO05D005868 2.9e-36 155.2 116 61.2
AT3G60150 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 3.7e-36 154.8 116 61.2
Thhalv10006276m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 3.7e-36 154.8 116 60.3
Thhalv10001659m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 4.9e-36 154.5 116 60.3
Actinidia05803 Actinidia chinensis HOM05D004886 ORTHO05D005868 6.4e-36 154.1 116 63.8
BcaB02g08829 Brassica carinata HOM05D004886 ORTHO05D005868 6.4e-36 154.1 116 60.3
Carub.0005s2688 Capsella rubella HOM05D004886 ORTHO05D005868 6.4e-36 154.1 115 61.7
Lalb_Chr07g0194931 Lupinus albus HOM05D004886 ORTHO05D005868 6.4e-36 154.1 116 62.1
CSS0044670 Camellia sinensis var. sinensis HOM05D004886 ORTHO05D005868 8.3e-36 153.7 116 63.8
Lj9C547T8 Lonicera japonica HOM05D004886 ORTHO05D005868 8.3e-36 153.7 116 62.1
A04p01810 Brassica napus HOM05D004886 ORTHO05D005868 1.1e-35 153.3 116 59.5
BraA04t15905Z Brassica rapa HOM05D004886 ORTHO05D005868 1.1e-35 153.3 116 59.5
ECA246G0884 Erigeron canadensis HOM05D004886 ORTHO05D005868 1.1e-35 153.3 116 61.2
Sp5g03060 Schrenkiella parvula HOM05D004886 ORTHO05D005868 1.1e-35 153.3 116 59.5
BcaC02g10116 Brassica carinata HOM05D004886 ORTHO05D005868 1.4e-35 152.9 116 59.5
C04p32550 Brassica napus HOM05D004886 ORTHO05D005868 1.4e-35 152.9 116 59.5
BolC4t24818H Brassica oleracea HOM05D004886 ORTHO05D005868 1.4e-35 152.9 116 59.5
Carub.0004s2709 Capsella rubella HOM05D004886 ORTHO05D005868 1.4e-35 152.9 116 59.5
Prupe.3G009000 Prunus persica HOM05D004886 ORTHO05D005868 2.4e-35 152.1 112 63.4
THA.LOC104817165 Tarenaya hassleriana HOM05D004886 ORTHO05D005868 2.4e-35 152.1 116 60.3
Actinidia30969 Actinidia chinensis HOM05D004886 ORTHO05D005868 3.2e-35 151.8 116 62.1
Manes.05G060800 Manihot esculenta HOM05D004886 ORTHO05D005868 3.2e-35 151.8 116 62.1
GSVIVG01018384001 Vitis vinifera HOM05D004886 ORTHO05D005868 3.2e-35 151.8 113 61.9
CARHR139740 Cardamine hirsuta HOM05D004886 ORTHO05D005868 5.4e-35 151.0 116 59.5
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 5.4e-35 151.0 112 61.6
CANSAT21G0345 Cannabis sativa HOM05D004886 ORTHO05D005868 7.0e-35 150.6 116 63.8
MD09G1285000 Malus domestica HOM05D004886 ORTHO05D005868 7.0e-35 150.6 124 57.3
Zm00001eb390620 Zea mays HOM05D004886 ORTHO05D005868 7.0e-35 150.6 113 64.6
Sp4g26620 Schrenkiella parvula HOM05D004886 ORTHO05D005868 9.2e-35 150.2 116 57.8
Aqoxy3G02476 Aquilegia oxysepala HOM05D004886 ORTHO05D005868 1.6e-34 149.4 116 62.1
BcaB02g08189 Brassica carinata HOM05D004886 ORTHO05D005868 2.1e-34 149.1 113 58.4
DCAR_015764 Daucus carota HOM05D004886 ORTHO05D005868 2.1e-34 149.1 149 51.0
Ah.09g232340 Amaranthus hybridus HOM05D004886 ORTHO05D005868 2.7e-34 148.7 109 65.1
PSO782G3769 Papaver somniferum HOM05D004886 ORTHO05D005868 6.0e-34 147.5 116 60.3
HPP92_003510 Vanilla planifolia HOM05D004886 ORTHO05D005868 2.3e-33 145.6 116 58.6
PSO063G1771 Papaver somniferum HOM05D004886 ORTHO05D005868 3.0e-33 145.2 116 59.5
HPP92_003514 Vanilla planifolia HOM05D004886 ORTHO05D005868 6.6e-33 144.1 113 59.3
MBI04_g13864_MAGBIO Magnolia biondii HOM05D004886 ORTHO05D005868 8.6e-33 143.7 113 57.5
Thecc.10G000600 Theobroma cacao HOM05D004886 ORTHO05D005868 9.5e-32 140.2 140 52.9
Haze_02935 Corylus avellana HOM05D004886 ORTHO05D005868 4.7e-31 137.9 120 55.8
TAR375G0952 Trochodendron aralioides HOM05D004886 ORTHO05D005868 8.1e-31 137.1 102 61.8
vmacro21096 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 4.0e-30 134.8 163 47.9
CDE11G0764 Ceratophyllum demersum HOM05D004886 ORTHO05D005868 1.2e-29 133.3 116 55.2
Sed0018381 Sechium edule HOM05D004886 ORTHO05D005868 2.0e-29 132.5 133 51.1
Sabra14G0137800 Salix brachista HOM05D004886 ORTHO05D005868 3.2e-27 125.2 209 38.8
Mapoly0033s0133 Marchantia polymorpha HOM05D004886 ORTHO05D005868 2.3e-25 119.0 106 48.1
Pp3c12_4990 Physcomitrium patens HOM05D004886 ORTHO05D005868 8.6e-25 117.1 109 48.6
Sabra14G0139800 Salix brachista HOM05D004886 ORTHO05D005868 6.2e-23 110.9 63 82.5
ClCG06G000740 Citrullus lanatus HOM05D004886 ORTHO05D005868 1.1e-22 110.2 63 81.0
Os03g0590700 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 8.9e-22 107.1 63 79.4
Dinv44001 Davidia involucrata HOM05D004886 ORTHO05D005868 1.2e-21 106.7 87 56.3
Cpa.g.c35192.2 Carica papaya HOM05D004886 ORTHO05D005868 4.9e-20 101.3 59 76.3
SHI13674 Sapria himalayana HOM05D004886 ORTHO05D005868 1.4e-19 99.8 89 52.8
BraA05t19447Z Brassica rapa HOM05D004886 ORTHO05D005868 1.9e-19 99.4 63 69.8
BraA05t19448Z Brassica rapa HOM05D004886 ORTHO05D005868 1.9e-19 99.4 63 69.8
ATR0049G020 Amborella trichopoda HOM05D004886 ORTHO05D005868 1.2e-18 96.7 63 68.3
A05p04700 Brassica napus HOM05D004886 ORTHO05D005868 1.2e-18 96.7 63 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1568 Anthoceros agrestis HOM05D004886 ORTHO05D005868 6.2e-15 84.3 84 41.7
SMO364G0857 Selaginella moellendorffii HOM05D004886 ORTHO05D005868 2.4e-14 82.4 106 37.7
Cc04_g01570 Coffea canephora HOM05D004886 ORTHO05D005868 9.0e-14 80.5 47 74.5
FAN10G0867 Fragaria x ananassa HOM05D004886 ORTHO05D005868 3.4e-13 78.6 104 44.2
Cre12.g496800 Chlamydomonas reinhardtii HOM05D004886 ORTHO05D005868 9.9e-13 77.0 102 33.3
Sc23g0004110 Simmondsia chinensis HOM05D004886 ORTHO05D005868 3.8e-12 75.1 73 46.6
MCO06G183 Micromonas commoda HOM05D004886 ORTHO05D005868 2.4e-11 72.4 106 33.0
Nn1g07677 Nelumbo nucifera HOM05D004886 ORTHO05D005868 2.4e-11 72.4 49 57.1
AUR62038597 Chenopodium quinoa HOM05D004886 ORTHO05D005868 3.2e-11 72.0 41 73.2
Cpa.g.sc587.3 Carica papaya HOM05D004886 ORTHO05D005868 9.3e-11 70.5 42 66.7
Aa31LG10G14300 Aethionema arabicum HOM05D004886 ORTHO05D005868 4.6e-10 68.2 41 65.9
Dinv43568 Davidia involucrata HOM05D004886 ORTHO05D005868 3.9e-09 65.1 41 61.0
PRCOL_00001209 Prasinoderma coloniale HOM05D004886 ORTHO05D005868 3.9e-09 65.1 102 34.3
CsaV3_3G022410 Cucumis sativus L. HOM05D004886 ORTHO05D005868 5.1e-09 64.7 38 65.8
CsaV3_5G024660 Cucumis sativus L. HOM05D004886 ORTHO05D005868 5.1e-09 64.7 38 65.8
Os10g0571100 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 1.5e-08 63.2 49 53.1
MD04G1140000 Malus domestica HOM05D004886 ORTHO05D005868 2.5e-08 62.4 42 59.5
Sabra14G0139700 Salix brachista HOM05D004886 ORTHO05D005868 2.5e-08 62.4 49 51.0
SalBow2G0716 Salvia bowleyana HOM05D000282 ORTHO05D000272 1.1e-06 57.0 35 77.1
SEGI_24442 Sequoiadendron giganteum HOM05D004886 ORTHO05D005868 2.4e-06 55.8 32 62.5


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