Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28726 Striga asiatica HOM05D003186 ORTHO05D003452 3.2e-165 585.1 314 100.0
SGA_v2.0_scaffold77G25250 Striga asiatica HOM05D003186 ORTHO05D003452 5.2e-75 285.4 300 61.0
MSTRG.17102 Avicennia marina HOM05D003186 ORTHO05D003452 9.9e-58 228.0 305 52.5
MSTRG.28131 Avicennia marina HOM05D003186 ORTHO05D003452 1.7e-57 227.3 304 50.7
Migut.B01481 Erythranthe guttata HOM05D003186 ORTHO05D003452 2.1e-55 220.3 300 51.7
SalBow4G0872 Salvia bowleyana HOM05D003186 ORTHO05D003452 7.4e-53 211.8 295 50.5
Solyc01g088530.2 Solanum lycopersicum HOM05D003186 ORTHO05D003452 5.3e-51 205.7 302 50.3
PGSC0003DMG400001684 Solanum tuberosum HOM05D003186 ORTHO05D003452 2.0e-50 203.8 306 48.7
Sopen01g035390 Solanum pennellii HOM05D003186 ORTHO05D003452 9.9e-50 201.4 304 49.0
Migut.N01712 Erythranthe guttata HOM05D003186 ORTHO05D003452 8.4e-49 198.4 300 48.0
MSTRG.20661 Avicennia marina HOM05D003186 ORTHO05D003452 1.1e-48 198.0 308 46.1
Oeu024385.1 Olea europaea HOM05D003186 ORTHO05D003452 9.3e-48 194.9 314 47.8
Nitab4.5_0006873g0020 Nicotiana tabacum HOM05D003186 ORTHO05D003452 2.3e-46 190.3 315 45.7
Nitab4.5_0004088g0100 Nicotiana tabacum HOM05D003186 ORTHO05D003452 1.1e-45 188.0 313 45.7
Oeu037407.1 Olea europaea HOM05D003186 ORTHO05D003452 1.5e-45 187.6 286 46.5
Migut.O00568 Erythranthe guttata HOM05D003186 ORTHO05D003452 2.5e-45 186.8 292 47.3
Cc02_g25690 Coffea canephora HOM05D003186 ORTHO05D003452 3.3e-45 186.4 314 49.0
Oeu034770.1 Olea europaea HOM05D003186 ORTHO05D003452 2.8e-44 183.3 308 45.5
Dinv43584 Davidia involucrata HOM05D003186 ORTHO05D003452 1.8e-43 180.6 307 45.3
Lj9P549T18 Lonicera japonica HOM05D003186 ORTHO05D003452 2.4e-43 180.3 295 44.4
Hma1.2p1_0021F.1_g014275 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 7.6e-42 175.3 295 46.1
Hma1.2p1_0021F.1_g014290 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 7.6e-42 175.3 295 46.1
CAN.G756.11 Capsicum annuum HOM05D003186 ORTHO05D003452 2.2e-41 173.7 308 43.5
Peaxi162Scf00745g00012 Petunia axillaris HOM05D003186 ORTHO05D003452 3.8e-41 172.9 319 43.3
Dinv44017 Davidia involucrata HOM05D003186 ORTHO05D003452 6.5e-41 172.2 308 44.5
Cfa011019 Carpinus fangiana HOM05D003186 ORTHO05D003452 5.7e-37 159.1 313 41.5
TAR375G0380 Trochodendron aralioides HOM05D003186 ORTHO05D003452 9.6e-37 158.3 295 45.1
Haze_02907 Corylus avellana HOM05D003186 ORTHO05D003452 1.4e-35 154.5 315 41.6
COL.COLO4_12347 Corchorus olitorius HOM05D003186 ORTHO05D003452 5.9e-34 149.1 308 42.2
Lj1g0019973 Lotus japonicus HOM05D003186 ORTHO05D003452 7.6e-34 148.7 308 41.2
SalBow5G4877 Salvia bowleyana HOM05D003186 ORTHO05D003452 7.6e-34 148.7 297 40.1
TAR374G0545 Trochodendron aralioides HOM05D003186 ORTHO05D003452 1.3e-33 147.9 299 43.8
Duzib268G0279 Durio zibethinus HOM05D003186 ORTHO05D003452 2.2e-33 147.1 306 42.2
Lsat_1_v5_gn_7_11660 Lactuca sativa HOM05D003186 ORTHO05D003452 3.8e-33 146.4 326 41.4
Thecc.01G403000 Theobroma cacao HOM05D003186 ORTHO05D003452 8.5e-33 145.2 310 43.5
CiPaw.13G021700 Carya illinoinensis HOM05D003186 ORTHO05D003452 4.2e-32 142.9 316 41.5
Phvul.008G051200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 3.6e-31 139.8 315 39.7
CANSAT25G0028 Cannabis sativa HOM05D003186 ORTHO05D003452 6.1e-31 139.0 289 40.8
Actinidia33295 Actinidia chinensis HOM05D003186 ORTHO05D003452 1.3e-30 137.9 322 37.3
Glyma.18G245700 Glycine max HOM05D003186 ORTHO05D003452 1.8e-30 137.5 301 40.5
Rhsim07G0039500 Rhododendron simsii HOM05D003186 ORTHO05D003452 1.8e-30 137.5 315 42.9
TPR.G27403 Trifolium pratense HOM05D003186 ORTHO05D003452 1.8e-30 137.5 313 39.3
Gorai.004G067500 Gossypium raimondii HOM05D003186 ORTHO05D003452 2.3e-30 137.1 312 41.0
VMungo1383G2278 Vigna mungo HOM05D003186 ORTHO05D003452 2.3e-30 137.1 318 39.6
Duzib138G0449 Durio zibethinus HOM05D003186 ORTHO05D003452 3.0e-30 136.7 310 42.6
Gohir.D08G065200 Gossypium hirsutum HOM05D003186 ORTHO05D003452 5.1e-30 136.0 312 42.0
MD07G1088100 Malus domestica HOM05D003186 ORTHO05D003452 5.1e-30 136.0 319 39.5
CiPaw.14G016300 Carya illinoinensis HOM05D003186 ORTHO05D003452 6.7e-30 135.6 324 38.0
Manes.05G059100 Manihot esculenta HOM05D003186 ORTHO05D003452 6.7e-30 135.6 322 39.4
Potri.014G043800 Populus trichocarpa HOM05D003186 ORTHO05D003452 8.7e-30 135.2 329 40.7
PGR042G2698 Punica granatum HOM05D003186 ORTHO05D003452 1.1e-29 134.8 320 42.5
Glyma.09G247300 Glycine max HOM05D003186 ORTHO05D003452 1.9e-29 134.0 312 38.5
Sabra02G0105200 Salix brachista HOM05D003186 ORTHO05D003452 2.5e-29 133.7 336 41.1
FAN06G1121 Fragaria x ananassa HOM05D003186 ORTHO05D003452 3.3e-29 133.3 321 40.5
Psat3g101600 Pisum sativum HOM05D003186 ORTHO05D003452 1.6e-28 131.0 310 38.4
Gohir.A08G055900 Gossypium hirsutum HOM05D003186 ORTHO05D003452 2.8e-28 130.2 309 38.5
Gohir.D12G102500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 2.8e-28 130.2 302 39.4
Potri.002G135400 Populus trichocarpa HOM05D003186 ORTHO05D003452 2.8e-28 130.2 336 38.4
Atru.chr5.38 Acer truncatum HOM05D003186 ORTHO05D003452 3.7e-28 129.8 317 38.8
Gorai.008G111700 Gossypium raimondii HOM05D003186 ORTHO05D003452 3.7e-28 129.8 302 39.4
Ciclev10021280m.g Citrus clementina HOM05D003186 ORTHO05D003452 4.8e-28 129.4 302 39.4
FvH4_7g08720 Fragaria vesca HOM05D003186 ORTHO05D003452 4.8e-28 129.4 331 40.2
Gohir.A12G099500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 8.2e-28 128.6 302 39.1
Sabra14G0031700 Salix brachista HOM05D003186 ORTHO05D003452 1.1e-27 128.3 337 38.9
QL04p025941 Quercus lobata HOM05D003186 ORTHO05D003452 1.4e-27 127.9 320 40.6
QL04p026933 Quercus lobata HOM05D003186 ORTHO05D003452 1.4e-27 127.9 320 40.6
Ca_08022_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 2.4e-27 127.1 315 38.7
FAN10G4096 Fragaria x ananassa HOM05D003186 ORTHO05D003452 2.4e-27 127.1 326 40.2
Prupe.2G114900 Prunus persica HOM05D003186 ORTHO05D003452 2.4e-27 127.1 314 38.2
Rhsim01G0144500 Rhododendron simsii HOM05D003186 ORTHO05D003452 3.1e-27 126.7 296 40.2
DCAR_025021 Daucus carota HOM05D003186 ORTHO05D003452 4.1e-27 126.3 303 38.6
FAN01G1315 Fragaria x ananassa HOM05D003186 ORTHO05D003452 5.3e-27 125.9 329 38.6
Sed0022506 Sechium edule HOM05D003186 ORTHO05D003452 5.3e-27 125.9 327 40.7
Atru.chr5.68 Acer truncatum HOM05D003186 ORTHO05D003452 9.0e-27 125.2 319 38.2
Eucgr.E01708 Eucalyptus grandis HOM05D003186 ORTHO05D003452 1.2e-26 124.8 326 39.0
THA.LOC104817174 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 1.5e-26 124.4 304 40.8
ECA236G2684 Erigeron canadensis HOM05D003186 ORTHO05D003452 2.6e-26 123.6 315 38.1
Gohir.A08G141000 Gossypium hirsutum HOM05D003186 ORTHO05D003452 2.6e-26 123.6 298 37.6
Gorai.004G168400 Gossypium raimondii HOM05D003186 ORTHO05D003452 2.6e-26 123.6 304 39.8
Actinidia05791 Actinidia chinensis HOM05D003186 ORTHO05D003452 4.5e-26 122.9 294 38.4
FAN10G1238 Fragaria x ananassa HOM05D003186 ORTHO05D003452 4.5e-26 122.9 327 38.8
Nitab4.5_0000204g0050 Nicotiana tabacum HOM05D003186 ORTHO05D003452 7.7e-26 122.1 311 39.2
Gohir.D08G162100 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.0e-25 121.7 298 37.6
Gohir.D11G078500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.0e-25 121.7 295 40.0
Gorai.007G084000 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.0e-25 121.7 295 40.0
Nitab4.5_0016340g0010 Nicotiana tabacum HOM05D003186 ORTHO05D003452 1.0e-25 121.7 310 39.4
CsaV3_6G006600 Cucumis sativus L. HOM05D003186 ORTHO05D003452 1.3e-25 121.3 332 37.0
FAN03G3421 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.3e-25 121.3 328 38.4
Thhalv10006502m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 3.8e-25 119.8 298 37.9
TWI59G0953 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 3.8e-25 119.8 323 38.4
HanXRQChr01g0017501 Helianthus annuus HOM05D003186 ORTHO05D003452 6.5e-25 119.0 297 37.0
unitig_750.g28400 Utricularia gibba HOM05D003186 ORTHO05D003452 6.5e-25 119.0 308 38.0
Sp5g03010 Schrenkiella parvula HOM05D003186 ORTHO05D003452 1.1e-24 118.2 296 40.5
arahy.Tifrunner.gnm1.ann1.U9U8W4 Arachis hypogaea HOM05D003186 ORTHO05D003452 2.5e-24 117.1 317 39.4
Duzib133G0015 Durio zibethinus HOM05D003186 ORTHO05D003452 2.5e-24 117.1 312 39.4
THA.LOC104803082 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 5.5e-24 115.9 331 38.1
MBI04_g03333_MAGBIO Magnolia biondii HOM05D003186 ORTHO05D003452 1.6e-23 114.4 292 38.7
ClCG06G000800 Citrullus lanatus HOM05D003186 ORTHO05D003452 4.6e-23 112.8 335 35.5
MELO3C022461.2 Cucumis melo HOM05D003186 ORTHO05D003452 6.1e-23 112.5 334 35.6
Gohir.A11G073800 Gossypium hirsutum HOM05D003186 ORTHO05D003452 6.1e-23 112.5 294 38.8
Sed0018587 Sechium edule HOM05D003186 ORTHO05D003452 3.0e-22 110.2 314 37.3
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 3.9e-22 109.8 317 39.4
Nn1g00622 Nelumbo nucifera HOM05D003186 ORTHO05D003452 6.7e-22 109.0 309 37.2
Lsat_1_v5_gn_4_38621 Lactuca sativa HOM05D003186 ORTHO05D003452 8.8e-22 108.6 316 34.5
TWI23G1002 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 1.1e-21 108.2 277 38.6
AL5G42410 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 2.0e-21 107.5 303 36.6
A09p52480 Brassica napus HOM05D003186 ORTHO05D003452 4.3e-21 106.3 290 34.8
AT3G60200 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 9.7e-21 105.1 302 38.7
ECA248G0129 Erigeron canadensis HOM05D003186 ORTHO05D003452 1.3e-20 104.8 295 38.6
BcaC07g40522 Brassica carinata HOM05D003186 ORTHO05D003452 2.2e-20 104.0 288 35.4
C08p35230 Brassica napus HOM05D003186 ORTHO05D003452 2.2e-20 104.0 288 35.4
BolC8t51117H Brassica oleracea HOM05D003186 ORTHO05D003452 2.2e-20 104.0 288 35.4
BraA09t40678Z Brassica rapa HOM05D003186 ORTHO05D003452 2.8e-20 103.6 288 34.4
PGR004G1173 Punica granatum HOM05D003186 ORTHO05D003452 6.3e-20 102.4 197 42.1
HanXRQChr04g0113081 Helianthus annuus HOM05D003186 ORTHO05D003452 2.4e-19 100.5 327 35.8
CsaV3_3G010380 Cucumis sativus L. HOM05D003186 ORTHO05D003452 4.1e-19 99.8 311 33.8
Lsat_1_v5_gn_0_5020 Lactuca sativa HOM05D003186 ORTHO05D003452 4.1e-19 99.8 336 34.8
A04p01780 Brassica napus HOM05D003186 ORTHO05D003452 9.1e-19 98.6 297 37.7
BolC4t24815H Brassica oleracea HOM05D003186 ORTHO05D003452 9.1e-19 98.6 298 37.9
Lj3g0018708 Lotus japonicus HOM05D003186 ORTHO05D003452 9.1e-19 98.6 308 36.7
Aa31LG10G14340 Aethionema arabicum HOM05D003186 ORTHO05D003452 1.2e-18 98.2 305 37.4
BcaC07g40415 Brassica carinata HOM05D003186 ORTHO05D003452 1.2e-18 98.2 293 36.5
HanXRQChr06g0168251 Helianthus annuus HOM05D003186 ORTHO05D003452 1.2e-18 98.2 305 35.1
BcaC02g10119 Brassica carinata HOM05D003186 ORTHO05D003452 1.5e-18 97.8 298 37.9
C04p32500 Brassica napus HOM05D003186 ORTHO05D003452 1.5e-18 97.8 298 37.9
Glyma.07G120800 Glycine max HOM05D003186 ORTHO05D003452 1.5e-18 97.8 308 34.4
CARHR139820 Cardamine hirsuta HOM05D003186 ORTHO05D003452 2.0e-18 97.4 306 35.0
THA.LOC104827680 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 2.0e-18 97.4 305 33.1
BraA04t15902Z Brassica rapa HOM05D003186 ORTHO05D003452 3.4e-18 96.7 300 36.7
Thhalv10001551m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 3.4e-18 96.7 314 32.8
Lalb_Chr03g0040811 Lupinus albus HOM05D003186 ORTHO05D003452 4.5e-18 96.3 309 34.6
MELO3C006262.2 Cucumis melo HOM05D003186 ORTHO05D003452 7.7e-18 95.5 311 33.4
HanXRQChr11g0344041 Helianthus annuus HOM05D003186 ORTHO05D003452 2.9e-17 93.6 131 53.4
Aa31LG1G26150 Aethionema arabicum HOM05D003186 ORTHO05D003452 5.0e-17 92.8 318 34.3
AL4G43640 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 6.5e-17 92.4 314 32.2
HanXRQChr17g0550401 Helianthus annuus HOM05D003186 ORTHO05D003452 6.5e-17 92.4 319 32.6
CARHR170520 Cardamine hirsuta HOM05D003186 ORTHO05D003452 1.1e-16 91.7 311 37.9
AT2G44600 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 2.5e-16 90.5 313 34.2
Eucgr.D01170 Eucalyptus grandis HOM05D003186 ORTHO05D003452 2.5e-16 90.5 347 36.9
Phvul.010G041200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 3.2e-16 90.1 307 34.9
BraA05t19451Z Brassica rapa HOM05D003186 ORTHO05D003452 4.2e-16 89.7 295 33.6
A05p04750 Brassica napus HOM05D003186 ORTHO05D003452 5.5e-16 89.4 298 33.2
Carub.0004s2715 Capsella rubella HOM05D003186 ORTHO05D003452 5.5e-16 89.4 309 34.3
Zm00001eb072580 Zea mays HOM05D003186 ORTHO05D003452 5.5e-16 89.4 306 37.9
Ca_23143_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 9.4e-16 88.6 302 34.1
VMungo0331G1717 Vigna mungo HOM05D003186 ORTHO05D003452 9.4e-16 88.6 308 35.1
BolC4t22186H Brassica oleracea HOM05D003186 ORTHO05D003452 1.2e-15 88.2 294 32.7
PSO339G5444 Papaver somniferum HOM05D003186 ORTHO05D003452 1.2e-15 88.2 348 30.7
Sp4g26690 Schrenkiella parvula HOM05D003186 ORTHO05D003452 2.1e-15 87.4 313 34.5
TPR.G6017 Trifolium pratense HOM05D003186 ORTHO05D003452 7.9e-15 85.5 296 33.1
unitig_61.g26423 Utricularia gibba HOM05D003186 ORTHO05D003452 7.9e-15 85.5 293 33.4
BcaB02g08836 Brassica carinata HOM05D003186 ORTHO05D003452 1.8e-14 84.3 305 32.8
Ah.05g177570 Amaranthus hybridus HOM05D003186 ORTHO05D003452 6.7e-14 82.4 313 33.9
Glyma.03G103001 Glycine max HOM05D003186 ORTHO05D003452 6.7e-14 82.4 321 34.9
unitig_26.g8864 Utricularia gibba HOM05D003186 ORTHO05D003452 6.7e-14 82.4 281 32.4
BcaC02g12291 Brassica carinata HOM05D003186 ORTHO05D003452 1.5e-13 81.3 301 33.6
C04p05560 Brassica napus HOM05D003186 ORTHO05D003452 1.5e-13 81.3 301 33.6
ECA234G0702 Erigeron canadensis HOM05D003186 ORTHO05D003452 5.7e-13 79.3 289 31.5
Sed0008398 Sechium edule HOM05D003186 ORTHO05D003452 1.3e-12 78.2 323 31.0
BcaB02g08186 Brassica carinata HOM05D003186 ORTHO05D003452 2.2e-12 77.4 311 36.0
Psat4g219160 Pisum sativum HOM05D003186 ORTHO05D003452 4.8e-12 76.3 291 30.2
Zm00001eb251070 Zea mays HOM05D003186 ORTHO05D003452 1.1e-11 75.1 299 33.1
PSO648G0113 Papaver somniferum HOM05D003186 ORTHO05D003452 1.4e-11 74.7 340 29.7
Hund17130 Selenicereus undatus HOM05D003186 ORTHO05D003452 3.1e-11 73.6 300 30.7
BcaC02g07102 Brassica carinata HOM05D003186 ORTHO05D003452 1.2e-10 71.6 283 32.9
BcaC08g45026 Brassica carinata HOM05D003186 ORTHO05D003452 1.2e-10 71.6 167 37.1
C06p26570 Brassica napus HOM05D003186 ORTHO05D003452 1.2e-10 71.6 167 37.1
A07p25000 Brassica napus HOM05D003186 ORTHO05D003452 1.6e-10 71.2 279 30.5
BolC6t37821H Brassica oleracea HOM05D003186 ORTHO05D003452 3.5e-10 70.1 163 37.4
HPP92_025455 Vanilla planifolia HOM05D003186 ORTHO05D003452 3.5e-10 70.1 303 30.7
Nn6g33672 Nelumbo nucifera HOM05D003186 ORTHO05D003452 5.9e-10 69.3 215 37.2
BcaB02g07428 Brassica carinata HOM05D003186 ORTHO05D003452 1.0e-09 68.6 160 37.5
BraA07t30140Z Brassica rapa HOM05D003186 ORTHO05D003452 1.7e-09 67.8 279 28.7
C04p71110 Brassica napus HOM05D003186 ORTHO05D003452 2.2e-09 67.4 283 32.2
BolC4t28614H Brassica oleracea HOM05D003186 ORTHO05D003452 2.2e-09 67.4 283 32.2
Lalb_Chr19g0126271 Lupinus albus HOM05D003186 ORTHO05D003452 3.8e-09 66.6 306 33.3
ATR0665G229 Amborella trichopoda HOM05D003186 ORTHO05D003452 1.1e-08 65.1 308 30.2
EL10Ac1g00705 Beta vulgaris HOM05D003186 ORTHO05D003452 1.5e-08 64.7 317 28.4
DCAR_029522 Daucus carota HOM05D003186 ORTHO05D003452 1.9e-08 64.3 291 29.9
Lj7C552T25 Lonicera japonica HOM05D003186 ORTHO05D003452 3.2e-08 63.5 146 34.9
DCAR_015777 Daucus carota HOM05D003186 ORTHO05D003452 7.2e-08 62.4 303 29.7
BraA04t18801Z Brassica rapa HOM05D003186 ORTHO05D003452 9.4e-08 62.0 282 30.9
Zm00001eb187670 Zea mays HOM05D003186 ORTHO05D003452 4.7e-07 59.7 312 30.4
Carub.0005s2694 Capsella rubella HOM05D003186 ORTHO05D003452 1.4e-06 58.2 117 40.2
BcaC07g40516 Brassica carinata HOM05D003186 ORTHO05D003452 1.8e-06 57.8 61 45.9
BcaC08g45035 Brassica carinata HOM05D003186 ORTHO05D003452 2.3e-06 57.4 61 44.3
A04p33400 Brassica napus HOM05D003186 ORTHO05D003452 5.2e-06 56.2 284 30.3
Sc23g0004510 Simmondsia chinensis HOM05D003186 ORTHO05D003452 5.2e-06 56.2 64 51.6
AUR62023357 Chenopodium quinoa HOM05D003186 ORTHO05D003452 6.7e-06 55.8 137 36.5


User provided reference genes

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