Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 3.8e-85 318.2 162 100.0
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.8e-66 256.1 162 80.2
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 8.7e-66 253.8 164 79.3
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 8.1e-64 247.3 162 77.2
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 8.1e-64 247.3 162 77.2
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-60 236.5 163 73.6
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-60 236.5 164 72.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.9e-60 236.1 161 73.9
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 3.2e-60 235.3 161 73.3
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 4.2e-60 235.0 164 73.2
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 3.5e-59 231.9 162 71.6
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 3.5e-59 231.9 163 73.0
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.5e-59 231.9 163 72.4
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.6e-59 231.5 165 71.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.6e-59 231.5 165 71.5
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.0e-58 230.3 165 70.3
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.0e-58 228.8 162 71.0
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 3.9e-58 228.4 164 72.0
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 6.7e-58 227.6 164 68.9
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.1e-57 226.9 161 70.2
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.9e-57 226.1 162 68.5
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.5e-57 225.7 162 69.8
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 2.5e-57 225.7 166 72.3
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 3.3e-57 225.3 146 78.8
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.3e-56 223.4 163 68.7
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.3e-56 223.4 162 70.4
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 1.3e-56 223.4 162 69.1
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.6e-56 223.0 162 70.4
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.6e-56 223.0 147 76.2
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 2.8e-56 222.2 162 67.9
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.8e-56 222.2 162 69.1
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.7e-56 221.9 162 69.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 4.8e-56 221.5 162 69.8
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 4.8e-56 221.5 162 67.9
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 6.3e-56 221.1 162 69.1
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 6.3e-56 221.1 162 69.1
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 1.1e-55 220.3 162 67.9
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.4e-55 219.9 164 68.9
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.8e-55 219.5 166 66.9
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 3.1e-55 218.8 164 67.7
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 4.1e-55 218.4 162 68.5
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.1e-55 218.4 162 66.7
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 5.3e-55 218.0 163 69.9
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 6.9e-55 217.6 159 71.1
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 6.9e-55 217.6 162 66.0
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 9.0e-55 217.2 163 69.9
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.5e-54 216.5 167 65.9
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.5e-54 216.5 162 67.3
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.5e-54 216.5 164 68.3
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.0e-53 213.8 162 68.5
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.0e-53 213.8 163 68.7
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.9e-53 212.2 162 67.9
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.9e-53 212.2 162 66.0
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 5.0e-53 211.5 157 68.8
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 5.0e-53 211.5 166 64.5
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 6.5e-53 211.1 160 67.5
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 6.5e-53 211.1 160 67.5
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 8.4e-53 210.7 161 67.7
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 8.4e-53 210.7 160 66.2
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.1e-52 210.3 160 68.1
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.1e-52 210.3 163 66.9
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 1.1e-52 210.3 162 68.5
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.4e-52 209.9 164 67.7
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 1.9e-52 209.5 167 66.5
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.9e-52 209.5 162 67.3
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 3.2e-52 208.8 157 66.2
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 4.2e-52 208.4 163 65.6
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 5.5e-52 208.0 163 65.6
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 9.3e-52 207.2 158 67.1
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 9.3e-52 207.2 157 66.9
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 9.3e-52 207.2 158 67.1
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 9.3e-52 207.2 160 64.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.2e-51 206.8 157 67.5
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.2e-51 206.8 164 69.5
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.6e-51 206.5 157 66.9
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.6e-51 206.5 158 69.0
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 3.5e-51 205.3 157 67.5
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 3.5e-51 205.3 157 67.5
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.6e-51 204.9 156 68.6
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 7.9e-51 204.1 152 65.8
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 7.9e-51 204.1 156 67.3
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.3e-50 203.4 163 63.2
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.8e-50 203.0 160 64.4
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 3.0e-50 202.2 148 69.6
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 5.1e-50 201.4 155 66.5
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 8.7e-50 200.7 156 64.7
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.1e-49 200.3 157 63.1
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 1.5e-49 199.9 159 64.8
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.5e-49 199.9 157 62.4
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.5e-49 199.9 157 62.4
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.9e-49 199.5 167 60.5
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.9e-49 199.5 158 62.7
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 2.5e-49 199.1 157 66.2
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.5e-49 199.1 164 64.6
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.5e-49 199.1 161 59.6
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 4.3e-49 198.4 147 69.4
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 4.3e-49 198.4 160 62.5
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.3e-48 196.8 161 62.7
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.6e-48 196.4 159 63.5
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 6.3e-48 194.5 167 58.7
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 3.1e-47 192.2 160 61.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.1e-47 192.2 161 62.7
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 2.0e-46 189.5 146 69.9
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 4.5e-46 188.3 161 59.0
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 7.7e-46 187.6 163 58.9
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 8.5e-45 184.1 119 68.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.1e-44 183.7 107 81.3
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.7e-40 169.9 109 74.3
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 4.1e-39 165.2 151 56.3
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 7.9e-35 151.0 91 78.0
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.0e-34 150.6 139 53.2
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.1e-31 138.7 123 54.5
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.6e-30 136.0 77 75.3
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.1e-28 130.6 84 73.8
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 2.7e-27 125.9 105 64.8
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 5.7e-25 118.2 143 44.8
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 7.0e-23 111.3 89 61.8
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 2.0e-22 109.8 89 61.8
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 8.5e-21 104.4 163 45.4
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 3.7e-16 89.0 97 54.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 2.7e-14 82.8 124 36.3
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 1.1e-12 77.4 152 32.9
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 2.1e-11 73.2 47 66.0
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 4.7e-11 72.0 47 68.1
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 3.4e-09 65.9 131 32.8


User provided reference genes

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