Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 2.0e-74 282.3 139 100.0
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.5e-29 133.3 67 95.5
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 3.9e-22 108.6 61 82.0
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 3.6e-20 102.1 61 77.0
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 4.4e-18 95.1 61 70.5
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 4.4e-18 95.1 61 70.5
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 4.4e-18 95.1 67 67.2
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.7e-17 93.2 60 71.7
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 2.9e-17 92.4 64 65.6
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 2.9e-17 92.4 67 65.7
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.1e-16 90.5 63 65.1
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 1.4e-16 90.1 62 71.0
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.9e-16 89.7 61 70.5
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 3.2e-16 89.0 61 67.2
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 4.2e-16 88.6 66 62.1
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 4.2e-16 88.6 61 67.2
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 5.4e-16 88.2 61 63.9
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 7.1e-16 87.8 62 66.1
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 7.1e-16 87.8 62 66.1
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 7.1e-16 87.8 58 69.0
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.2e-15 87.0 63 63.5
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.2e-15 87.0 62 66.1
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.6e-15 86.7 60 66.7
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 2.1e-15 86.3 61 65.6
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 2.7e-15 85.9 65 63.1
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.7e-15 85.9 63 65.1
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 2.7e-15 85.9 61 65.6
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 3.5e-15 85.5 63 65.1
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 3.5e-15 85.5 60 61.7
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 3.5e-15 85.5 77 54.5
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 4.6e-15 85.1 61 63.9
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 4.6e-15 85.1 61 63.9
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 6.0e-15 84.7 66 63.6
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.0e-14 84.0 61 62.3
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 1.3e-14 83.6 66 56.1
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 1.3e-14 83.6 67 59.7
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.3e-14 83.6 66 65.2
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 1.7e-14 83.2 60 63.3
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 3.0e-14 82.4 59 66.1
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 3.9e-14 82.0 60 63.3
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 3.9e-14 82.0 61 68.9
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 3.9e-14 82.0 58 62.1
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 3.9e-14 82.0 58 62.1
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 5.1e-14 81.6 49 71.4
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 5.1e-14 81.6 59 62.7
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 5.1e-14 81.6 61 63.9
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 5.1e-14 81.6 66 60.6
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 8.7e-14 80.9 59 59.3
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 1.1e-13 80.5 57 68.4
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 1.1e-13 80.5 60 65.0
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 1.9e-13 79.7 67 62.7
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 1.9e-13 79.7 61 60.7
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.9e-13 79.7 60 58.3
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 2.5e-13 79.3 61 60.7
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 2.5e-13 79.3 57 66.7
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 2.5e-13 79.3 59 59.3
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.3e-13 79.0 61 55.7
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 3.3e-13 79.0 59 57.6
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 4.3e-13 78.6 56 60.7
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 4.3e-13 78.6 49 71.4
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 4.3e-13 78.6 48 72.9
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 5.6e-13 78.2 77 55.8
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 5.6e-13 78.2 63 60.3
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 9.6e-13 77.4 62 54.8
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.6e-13 77.4 56 62.5
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-12 77.0 63 57.1
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.3e-12 77.0 77 55.8
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 1.6e-12 76.6 49 69.4
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.6e-12 76.6 49 69.4
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.6e-12 76.6 55 60.0
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 1.6e-12 76.6 60 55.0
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.6e-12 76.6 69 56.5
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 2.1e-12 76.3 61 55.7
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 4.8e-12 75.1 60 60.0
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 4.8e-12 75.1 77 53.2
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 6.2e-12 74.7 77 53.2
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 6.2e-12 74.7 77 53.2
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 6.2e-12 74.7 77 53.2
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 6.2e-12 74.7 62 59.7
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 8.1e-12 74.3 48 68.8
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 1.1e-11 73.9 47 68.1
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.4e-11 73.6 53 64.2
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.8e-11 73.2 78 53.8
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 1.8e-11 73.2 56 60.7
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 2.4e-11 72.8 77 51.9
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 2.4e-11 72.8 61 57.4
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 3.1e-11 72.4 77 54.5
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 3.1e-11 72.4 57 57.9
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 3.1e-11 72.4 57 57.9
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 4.0e-11 72.0 53 67.9
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 4.0e-11 72.0 66 53.0
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 6.9e-11 71.2 46 63.0
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 6.9e-11 71.2 59 55.9
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 9.0e-11 70.9 77 50.6
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 9.0e-11 70.9 77 50.6
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 9.0e-11 70.9 77 53.2
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 9.0e-11 70.9 60 51.7
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.5e-10 70.1 59 55.9
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.5e-10 70.1 63 52.4
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.4e-10 68.6 44 68.2
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 4.4e-10 68.6 46 67.4
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 5.8e-10 68.2 47 68.1
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 9.9e-10 67.4 52 59.6
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 9.9e-10 67.4 56 58.9
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 1.7e-09 66.6 51 58.8
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 1.7e-09 66.6 47 66.0
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 2.2e-09 66.2 44 65.9
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 3.0e-06 55.8 45 51.1


User provided reference genes

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