Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 2.3e-101 372.5 219 100.0
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.4e-79 299.3 219 79.5
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 9.3e-71 270.8 222 76.6
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.3e-69 266.9 236 69.1
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 1.5e-68 263.5 224 75.0
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 8.1e-67 257.7 226 67.7
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 1.2e-65 253.8 233 72.5
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 2.0e-65 253.1 239 67.8
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 2.6e-65 252.7 224 71.4
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 2.2e-64 249.6 222 66.7
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.1e-63 247.3 233 65.2
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.4e-63 246.9 220 65.9
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.4e-63 246.9 220 65.9
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.1e-62 243.0 233 68.7
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 6.0e-62 241.5 224 69.6
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 3.0e-61 239.2 220 65.0
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 3.0e-61 239.2 211 70.6
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.0e-61 239.2 238 60.5
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.0e-61 239.2 238 60.5
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 3.9e-61 238.8 221 72.9
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.5e-60 236.9 233 62.7
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 1.5e-60 236.9 224 72.3
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 1.9e-60 236.5 219 67.1
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 4.3e-60 235.3 219 68.9
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 7.4e-60 234.6 225 67.6
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 7.4e-60 234.6 224 66.1
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 2.1e-59 233.0 232 62.1
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 2.8e-59 232.6 225 67.6
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.8e-59 232.6 232 62.1
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 6.3e-59 231.5 238 63.0
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.3e-58 228.4 222 67.1
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.5e-57 226.9 220 66.4
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 2.0e-57 226.5 244 65.6
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 2.6e-57 226.1 231 66.2
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 5.0e-56 221.9 217 65.9
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.0e-56 221.9 216 64.4
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.2e-55 219.2 221 61.5
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 3.2e-55 219.2 239 66.1
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 4.2e-55 218.8 228 57.0
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 5.5e-55 218.4 231 63.2
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 7.2e-55 218.0 229 57.2
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.2e-54 217.2 223 65.5
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 2.1e-54 216.5 228 66.2
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.7e-54 216.1 243 63.4
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 3.6e-54 215.7 228 61.0
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 4.6e-54 215.3 198 69.7
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 4.6e-54 215.3 212 61.3
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 4.6e-54 215.3 232 67.7
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 4.6e-54 215.3 238 59.2
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 6.1e-54 214.9 221 62.0
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 7.9e-54 214.5 217 65.0
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 7.9e-54 214.5 230 65.2
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 2.3e-53 213.0 226 66.4
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 3.9e-53 212.2 228 66.2
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 3.9e-53 212.2 229 67.7
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 6.7e-53 211.5 240 63.3
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 1.5e-52 210.3 219 63.9
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 2.5e-52 209.5 237 58.6
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 2.2e-51 206.5 217 63.1
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 2.2e-51 206.5 239 61.1
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 2.2e-51 206.5 225 65.3
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 2.8e-51 206.1 213 62.9
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 3.7e-51 205.7 207 58.9
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 8.2e-51 204.5 236 62.7
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.4e-50 203.8 238 60.1
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 1.8e-50 203.4 233 62.7
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 2.4e-50 203.0 229 57.6
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.1e-50 202.6 231 60.2
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 3.1e-50 202.6 245 59.6
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 6.9e-50 201.4 236 59.3
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 6.9e-50 201.4 219 59.8
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 6.9e-50 201.4 219 59.8
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 9.1e-50 201.1 225 62.7
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 2.0e-49 199.9 218 60.1
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 2.6e-49 199.5 228 63.2
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 2.2e-48 196.4 228 66.7
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 2.2e-48 196.4 224 62.1
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 2.2e-48 196.4 227 60.8
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 2.2e-48 196.4 211 62.6
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 3.8e-48 195.7 230 58.7
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 3.8e-48 195.7 222 63.1
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 6.5e-48 194.9 228 58.3
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 1.1e-47 194.1 230 59.6
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.1e-47 194.1 240 59.6
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.4e-47 193.7 228 64.0
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 1.9e-47 193.4 219 63.0
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.9e-47 193.4 248 56.0
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 4.2e-47 192.2 221 60.2
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.2e-46 190.7 220 60.0
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 1.2e-46 190.7 222 61.7
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 2.1e-46 189.9 231 59.3
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 4.6e-46 188.7 222 61.3
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 6.1e-46 188.3 229 59.8
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 6.1e-46 188.3 213 62.0
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 7.9e-46 188.0 213 61.0
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 1.4e-45 187.2 230 58.7
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 1.4e-45 187.2 235 57.4
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 1.4e-45 187.2 218 57.3
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.8e-45 186.8 234 62.4
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 3.9e-45 185.7 221 62.9
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 3.9e-45 185.7 221 62.9
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 6.7e-45 184.9 210 65.2
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 6.7e-45 184.9 241 63.1
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 8.8e-45 184.5 230 58.3
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.5e-44 183.7 216 60.6
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 3.3e-44 182.6 213 59.6
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 4.4e-44 182.2 217 60.8
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-43 180.6 225 60.9
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 1.3e-43 180.6 234 58.5
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 1.7e-43 180.3 244 57.8
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 1.7e-43 180.3 165 72.7
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 2.2e-43 179.9 231 59.7
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.2e-43 179.9 226 59.3
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 3.7e-43 179.1 213 57.7
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 3.7e-43 179.1 219 60.7
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 4.8e-43 178.7 223 55.2
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 8.2e-43 177.9 235 58.7
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 9.1e-42 174.5 243 56.0
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 1.2e-41 174.1 243 56.0
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 7.7e-41 171.4 234 57.3
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 1.7e-40 170.2 221 57.5
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 1.7e-40 170.2 221 56.6
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 1.7e-40 170.2 221 57.5
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 2.2e-40 169.9 223 57.8
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.1e-39 167.5 239 56.9
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 1.9e-39 166.8 225 57.8
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.5e-39 166.4 220 57.3
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 2.7e-38 162.9 221 52.9
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 2.7e-38 162.9 219 54.8
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 4.7e-38 162.2 238 55.5
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 5.2e-37 158.7 232 55.6
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.0e-36 156.8 229 54.1
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 1.3e-35 154.1 243 48.6
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.3e-35 154.1 243 48.6
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.4e-34 150.6 245 44.5
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 7.0e-34 148.3 213 51.6
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 1.2e-33 147.5 240 54.2
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.7e-32 143.7 200 53.5
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.8e-32 142.5 220 54.1
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 1.1e-31 141.0 229 55.0
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.5e-31 138.7 240 47.9
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 7.2e-31 138.3 217 50.7
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 7.2e-31 138.3 133 64.7
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 9.4e-31 137.9 199 53.8
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.8e-29 133.7 218 49.5
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 3.3e-28 129.4 134 76.9
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 4.4e-28 129.0 81 80.2
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.8e-27 126.3 88 69.3
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.4e-26 124.0 191 52.9
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.1e-26 122.9 203 54.2
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 4.1e-26 122.5 103 63.1
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.6e-22 109.4 136 61.0
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 4.7e-22 109.0 136 63.2
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 6.1e-22 108.6 75 72.0
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 3.4e-20 102.8 230 44.3
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 2.2e-19 100.1 139 53.2
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 3.7e-19 99.4 165 57.6
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 8.3e-19 98.2 79 60.8
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 3.1e-18 96.3 66 71.2
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.1e-18 96.3 77 63.6
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 3.1e-18 96.3 81 66.7
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 9.1e-18 94.7 84 61.9
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.9e-16 89.7 72 63.9
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 3.6e-14 82.8 241 39.4
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 8.8e-13 78.2 252 37.3
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.7e-12 75.5 98 52.0
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 6.3e-11 72.0 45 80.0
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 6.3e-11 72.0 266 37.6
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.8e-10 70.5 173 35.8
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 5.9e-09 65.5 87 47.1
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 5.9e-09 65.5 108 48.1
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 7.8e-09 65.1 78 50.0
Sabra06G0076200 Salix brachista HOM05D003822 ORTHO05D349384 2.5e-07 60.1 106 51.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.3e-07 58.5 136 47.8
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 7.3e-07 58.5 31 87.1
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 7.3e-07 58.5 79 45.6
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 1.6e-06 57.4 264 37.9


User provided reference genes

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