Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.5e-141 506.1 251 100.0
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.7e-68 263.5 251 55.0
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 2.5e-64 249.6 251 53.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.8e-62 243.4 251 51.4
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.5e-52 208.4 248 45.6
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.5e-52 208.4 248 45.6
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 5.5e-51 205.3 248 46.0
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 3.6e-50 202.6 248 44.4
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 6.1e-50 201.8 252 43.7
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.0e-49 201.1 244 45.5
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.3e-49 199.9 247 43.7
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.1e-48 197.6 253 43.1
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 2.6e-48 196.4 219 47.9
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 4.8e-47 192.2 251 42.6
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 8.2e-47 191.4 227 42.7
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 2.0e-45 186.8 248 41.9
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 4.5e-45 185.7 248 42.3
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 5.9e-45 185.3 251 39.8
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 7.7e-45 184.9 234 42.7
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 7.7e-45 184.9 218 44.5
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.3e-44 184.1 226 44.7
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.8e-44 182.6 251 41.8
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 6.5e-44 181.8 251 41.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.1e-43 181.0 175 51.4
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 1.1e-43 181.0 217 43.3
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.2e-43 179.5 217 42.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 5.5e-43 178.7 178 50.0
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 5.5e-43 178.7 173 50.9
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 7.2e-43 178.3 228 39.9
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.2e-42 177.6 222 44.1
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 8.0e-42 174.9 189 47.1
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.8e-41 173.7 245 40.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 4.0e-41 172.6 248 42.3
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 4.0e-41 172.6 259 39.4
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 6.7e-41 171.8 248 40.3
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 8.8e-41 171.4 248 42.3
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.0e-40 170.2 248 41.9
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.3e-40 169.5 249 36.5
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 4.4e-40 169.1 251 39.4
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 5.7e-40 168.7 175 46.3
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 4.8e-39 165.6 174 42.5
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 2.4e-38 163.3 246 39.0
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.4e-38 163.3 200 43.5
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.5e-37 159.5 185 41.1
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.3e-36 157.5 257 33.9
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 2.2e-36 156.8 219 40.2
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 2.9e-36 156.4 162 48.1
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.8e-36 156.0 219 37.0
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 5.0e-36 155.6 175 43.4
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 5.0e-36 155.6 258 36.0
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 6.5e-36 155.2 175 42.9
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.9e-35 153.7 187 39.6
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 1.9e-35 153.7 232 38.4
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 2.5e-35 153.3 185 40.0
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 3.2e-35 152.9 249 36.1
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 5.5e-35 152.1 224 38.8
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 5.5e-35 152.1 220 40.0
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 5.5e-35 152.1 131 48.9
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 9.4e-35 151.4 175 45.1
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 2.1e-34 150.2 179 42.5
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.7e-34 149.8 237 37.1
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.7e-34 149.8 224 38.4
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.7e-34 149.8 237 37.1
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.1e-34 148.7 176 42.6
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 6.1e-34 148.7 187 38.5
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.0e-33 147.9 224 37.9
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 2.3e-33 146.7 176 40.9
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 2.3e-33 146.7 219 35.6
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 4.0e-33 146.0 176 42.0
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.2e-32 144.4 225 38.2
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.6e-32 143.3 175 41.7
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 4.4e-32 142.5 176 43.2
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 5.7e-32 142.1 176 39.8
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 7.5e-32 141.7 175 40.6
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 9.8e-32 141.4 176 40.3
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.2e-31 140.2 175 40.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 2.2e-31 140.2 175 40.0
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.7e-31 139.4 175 39.4
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 3.7e-31 139.4 175 39.4
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 3.7e-31 139.4 175 37.1
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 6.3e-31 138.7 175 40.6
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.4e-30 137.5 176 42.0
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 4.1e-30 136.0 177 38.4
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 9.1e-30 134.8 193 38.9
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.6e-29 134.0 177 36.2
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.7e-29 133.3 250 36.8
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 3.5e-29 132.9 263 33.8
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.9e-29 132.1 313 29.7
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 2.2e-28 130.2 185 37.3
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 3.8e-28 129.4 199 36.2
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 2.2e-23 113.6 130 46.9
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.2e-21 107.8 166 38.0
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 7.7e-21 105.1 82 57.3
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.0e-17 94.7 134 35.1
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 6.8e-17 92.0 83 49.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.5e-16 90.9 128 36.7
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.1e-14 84.7 94 41.5
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 3.5e-13 79.7 194 28.4
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 5.0e-12 75.9 94 38.3
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.6e-12 75.5 84 45.2
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.5e-11 74.3 92 32.6
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 1.9e-11 73.9 255 25.5
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.3e-11 72.8 87 31.0
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.5e-08 64.3 67 50.7
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 2.6e-08 63.5 197 24.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.3e-07 61.2 73 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 2.9e-07 60.1 181 23.2


User provided reference genes

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