Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 2.6e-136 488.8 265 100.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.2e-122 442.6 265 85.3
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.7e-119 433.0 265 86.4
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 2.9e-119 432.2 265 84.9
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 5.0e-119 431.4 261 85.1
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 85.3
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 6.5e-119 431.0 265 85.7
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 8.5e-119 430.6 265 84.5
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.4e-118 429.9 265 84.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.9e-118 429.5 265 84.5
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.5
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.6e-117 426.4 265 84.2
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.1e-117 426.0 265 84.5
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 83.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 84.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 85.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.6e-117 425.2 265 83.4
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.7e-117 424.9 265 84.5
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 4.7e-117 424.9 265 84.2
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 8.0e-117 424.1 262 85.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 82.3
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.3e-116 422.5 265 83.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 82.6
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.9e-116 421.8 265 83.4
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 3.9e-116 421.8 265 83.8
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 83.4
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 81.9
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.3e-115 418.7 264 83.0
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 7.4e-115 417.5 264 81.4
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 9.7e-115 417.2 265 80.8
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.7e-114 416.4 264 81.8
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 2.2e-114 416.0 265 84.5
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.2e-114 416.0 264 81.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 81.1
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 81.9
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 82.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 6.3e-114 414.5 264 81.8
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 8.2e-114 414.1 265 81.5
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.1e-113 413.7 261 82.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.4e-113 413.3 261 82.8
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 2.4e-113 412.5 259 82.2
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.4e-113 412.5 253 87.0
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 3.1e-113 412.1 259 82.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 3.1e-113 412.1 265 81.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 4.1e-113 411.8 261 82.0
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 4.1e-113 411.8 264 80.7
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 4.1e-113 411.8 265 81.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 4.1e-113 411.8 259 81.9
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 5.3e-113 411.4 265 81.5
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.3e-113 411.4 261 83.9
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 7.0e-113 411.0 265 80.8
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 9.1e-113 410.6 265 80.4
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.6e-112 409.8 255 84.7
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 2.0e-112 409.5 259 81.9
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 2.0e-112 409.5 259 81.9
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.5e-112 408.7 265 80.8
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 3.5e-112 408.7 262 80.5
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 5.9e-112 407.9 278 78.4
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 5.9e-112 407.9 261 80.8
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 7.7e-112 407.5 261 81.6
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.0e-111 407.1 261 81.2
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.0e-111 407.1 265 81.5
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.3e-111 406.8 262 80.9
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.2e-111 406.0 261 80.5
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.0e-111 404.8 265 80.8
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 6.5e-111 404.4 261 80.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 6.5e-111 404.4 260 81.2
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 6.5e-111 404.4 260 81.2
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.1e-110 403.7 265 80.4
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.1e-110 403.7 262 80.5
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.2e-110 402.1 261 80.1
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 4.2e-110 401.7 261 80.1
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 9.4e-110 400.6 261 80.5
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.2e-109 400.2 258 82.2
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.6e-109 399.8 262 79.8
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.1e-109 399.4 262 80.2
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.1e-109 399.4 262 80.9
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.6e-109 398.7 241 87.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.7e-109 398.3 262 78.2
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 4.0e-108 395.2 264 79.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.0e-108 395.2 264 78.4
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 5.2e-108 394.8 262 79.4
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 6.7e-108 394.4 264 78.8
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 8.8e-108 394.0 253 81.4
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.2e-107 393.7 262 79.0
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 1.5e-107 393.3 262 78.2
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 3.3e-107 392.1 250 82.0
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 3.3e-107 392.1 262 79.0
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 7.5e-107 391.0 253 81.0
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.7e-107 390.6 250 80.8
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.3e-106 390.2 261 78.5
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.3e-106 390.2 262 77.9
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 3.7e-106 388.7 262 77.1
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 8.3e-106 387.5 257 79.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.3e-105 384.8 254 80.7
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 7.0e-105 384.4 258 79.1
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 3.5e-104 382.1 262 75.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 3.5e-104 382.1 287 74.2
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 4.5e-104 381.7 254 79.9
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.5e-104 381.7 257 78.6
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.0e-103 380.6 286 73.8
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.8e-103 378.6 261 72.8
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 5.5e-102 374.8 225 86.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 7.2e-102 374.4 238 81.9
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.2e-99 367.1 262 74.0
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.6e-99 365.9 257 75.1
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.6e-99 365.9 261 72.4
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.4e-99 365.2 221 86.0
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.0e-96 356.3 264 70.8
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.0e-95 354.0 261 69.7
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 6.6e-95 351.3 265 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.9e-92 340.9 253 69.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.9e-92 340.9 258 69.4
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 4.1e-89 332.0 265 69.8
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 8.0e-85 317.8 212 80.2
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 8.0e-85 317.8 252 69.4
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-68 262.3 256 55.5
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.1e-65 254.2 265 57.0
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.2e-65 252.7 179 72.6
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.1e-61 240.0 151 84.1
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.1e-60 236.1 161 76.4
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-57 227.6 154 80.5
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.5e-51 207.2 245 44.5
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.7e-47 193.7 265 47.9
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.3e-46 189.1 246 41.5
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.6e-40 170.6 232 41.4
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.4e-35 152.9 95 78.9
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.2e-32 144.4 96 78.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.6e-32 144.1 239 35.6
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.4e-30 135.2 77 92.2
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.5e-27 127.5 75 89.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 5.8e-27 125.6 119 59.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.5e-22 110.9 237 32.9
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.1e-20 104.8 100 60.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.0e-11 73.9 75 60.0


User provided reference genes

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