Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.7e-102 374.8 178 100.0
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.4e-69 265.8 181 69.6
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.1e-66 256.9 178 67.4
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 6.0e-60 234.6 145 67.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.7e-59 233.0 134 73.1
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.0e-59 232.3 167 61.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 8.7e-59 230.7 125 74.4
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.5e-58 229.9 170 61.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 3.3e-58 228.8 176 58.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 5.6e-58 228.0 127 73.2
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 2.8e-57 225.7 169 59.2
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.4e-56 223.4 171 60.2
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 3.1e-56 222.2 125 70.4
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 6.9e-56 221.1 130 70.8
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.2e-55 220.3 171 57.9
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.0e-55 219.5 164 59.1
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.7e-54 216.5 126 73.0
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 2.9e-54 215.7 173 57.8
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 3.8e-54 215.3 175 56.0
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 3.8e-54 215.3 169 54.4
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 4.9e-54 214.9 176 55.7
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 4.9e-54 214.9 146 64.4
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 8.4e-54 214.2 174 54.6
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.4e-53 213.4 167 57.5
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.9e-53 213.0 180 52.8
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.4e-53 212.6 174 54.0
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.2e-53 211.8 169 59.8
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.2e-53 211.8 144 61.1
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 5.4e-53 211.5 175 54.3
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 5.4e-53 211.5 167 53.9
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 7.1e-53 211.1 175 54.9
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 7.1e-53 211.1 163 57.1
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 7.1e-53 211.1 174 57.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 7.1e-53 211.1 153 60.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 9.3e-53 210.7 143 60.8
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 9.3e-53 210.7 167 56.9
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.2e-52 210.3 165 57.0
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.6e-52 209.9 175 54.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.6e-52 209.9 158 59.5
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 6.0e-52 208.0 168 57.7
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 6.0e-52 208.0 143 60.1
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 7.9e-52 207.6 127 67.7
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 7.9e-52 207.6 172 55.2
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.3e-51 206.8 168 58.3
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.3e-51 206.8 169 58.6
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-51 206.8 170 58.2
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-51 206.8 169 58.6
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.8e-51 206.5 174 53.4
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.8e-51 206.5 131 64.9
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 3.9e-51 205.3 176 53.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 5.1e-51 204.9 164 54.9
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 5.1e-51 204.9 147 61.2
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 6.7e-51 204.5 156 60.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 8.7e-51 204.1 126 68.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 8.7e-51 204.1 147 61.2
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.1e-50 203.8 175 53.7
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.1e-50 203.8 147 61.2
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.5e-50 203.4 171 55.0
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.9e-50 203.0 167 55.1
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.9e-50 203.0 172 55.8
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 2.5e-50 202.6 174 52.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.5e-50 202.6 146 59.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 4.3e-50 201.8 173 51.4
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 4.3e-50 201.8 126 66.7
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.3e-50 201.8 170 51.8
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 7.4e-50 201.1 146 59.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 8.1e-49 197.6 171 50.3
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 3.1e-48 195.7 168 56.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 5.3e-48 194.9 185 50.8
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 6.9e-48 194.5 164 53.7
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.5e-47 193.4 146 58.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.5e-47 193.4 163 54.6
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.0e-47 193.0 163 52.8
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 7.6e-47 191.0 117 64.1
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 9.9e-47 190.7 145 54.5
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 1.3e-46 190.3 162 52.5
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.7e-46 189.9 144 61.1
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.4e-45 186.0 168 54.2
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.6e-44 181.8 128 62.5
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 3.0e-43 179.1 154 52.6
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.0e-43 179.1 140 54.3
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 3.3e-42 175.6 157 51.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.3e-42 175.6 120 60.0
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 4.3e-42 175.3 147 55.1
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.3e-41 173.7 136 53.7
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 4.8e-41 171.8 157 50.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 6.2e-41 171.4 168 48.2
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 1.8e-40 169.9 122 59.8
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.5e-39 166.8 168 47.6
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 3.8e-38 162.2 113 58.4
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.4e-37 160.2 167 49.1
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.9e-37 159.8 144 47.9
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 9.3e-37 157.5 183 45.4
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 5.7e-34 148.3 88 70.5
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.1e-28 128.3 86 64.0
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 7.9e-28 127.9 69 68.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 8.8e-19 97.8 164 32.9
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 8.2e-17 91.3 56 69.6
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.4e-15 85.9 83 48.2
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 6.5e-14 81.6 73 50.7
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 4.7e-12 75.5 41 65.9


User provided reference genes

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