Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 1.1e-259 899.4 447 100.0
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 1.2e-210 736.5 448 82.8
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 8.8e-209 730.3 450 83.3
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 4.5e-205 718.0 449 82.0
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 4.8e-199 698.0 398 86.7
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 4.2e-195 684.9 390 86.7
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 1.2e-194 683.3 449 77.5
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.6e-194 682.9 368 89.7
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 1.6e-194 682.9 396 84.1
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 1.4e-193 679.9 448 77.7
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 1.8e-193 679.5 446 77.6
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 3.0e-193 678.7 411 82.2
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 3.9e-193 678.3 398 85.4
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 6.7e-193 677.6 449 77.1
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 6.7e-193 677.6 445 77.5
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.1e-192 676.8 380 87.4
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 2.0e-192 676.0 445 77.5
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 2.6e-192 675.6 429 79.5
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 4.4e-192 674.9 398 83.7
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 7.4e-192 674.1 382 86.6
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 7.4e-192 674.1 383 86.7
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 9.7e-192 673.7 386 86.8
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.2e-191 672.5 383 85.6
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.2e-191 672.5 448 77.7
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 6.3e-191 671.0 424 79.5
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 8.2e-191 670.6 443 77.0
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 1.1e-190 670.2 446 78.0
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 1.1e-190 670.2 446 78.0
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.1e-190 670.2 448 77.5
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 1.8e-190 669.5 398 83.2
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.8e-190 669.5 418 79.2
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 3.1e-190 668.7 398 84.7
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 4.1e-190 668.3 394 83.8
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 7.0e-190 667.5 449 75.9
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 9.1e-190 667.2 448 77.0
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 2.0e-189 666.0 435 77.2
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 2.6e-189 665.6 383 85.9
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 3.5e-189 665.2 382 85.6
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 3.5e-189 665.2 446 75.6
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 4.5e-189 664.8 404 82.2
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 4.5e-189 664.8 451 76.7
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 4.5e-189 664.8 440 76.4
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 5.9e-189 664.5 378 86.0
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 5.9e-189 664.5 366 88.0
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 5.9e-189 664.5 446 75.6
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 1.0e-188 663.7 441 77.6
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 1.3e-188 663.3 383 84.1
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 1.3e-188 663.3 388 84.5
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 1.7e-188 662.9 383 84.9
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 2.2e-188 662.5 454 74.9
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 2.9e-188 662.1 366 88.3
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 3.8e-188 661.8 377 84.9
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 3.8e-188 661.8 380 86.3
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.0e-188 661.4 389 82.3
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 6.5e-188 661.0 419 79.2
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 6.5e-188 661.0 366 88.0
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 6.5e-188 661.0 366 87.7
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 6.5e-188 661.0 410 80.0
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 8.5e-188 660.6 447 75.4
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 1.5e-187 659.8 445 76.0
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 3.2e-187 658.7 383 84.3
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 3.2e-187 658.7 440 76.4
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 3.2e-187 658.7 440 76.4
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 3.2e-187 658.7 439 77.2
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 4.2e-187 658.3 383 84.9
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 5.5e-187 657.9 366 86.9
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 7.2e-187 657.5 436 76.6
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 7.2e-187 657.5 383 84.3
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 9.4e-187 657.1 383 83.6
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 1.2e-186 656.8 366 87.2
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 1.2e-186 656.8 448 74.6
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 2.7e-186 655.6 451 75.6
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 2.7e-186 655.6 366 87.2
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 3.6e-186 655.2 456 74.8
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 3.6e-186 655.2 466 73.4
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 6.1e-186 654.4 451 75.6
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 1.4e-185 653.3 397 81.4
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.4e-185 653.3 407 80.6
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 1.8e-185 652.9 383 83.6
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 2.3e-185 652.5 516 67.4
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 3.0e-185 652.1 448 73.7
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 6.7e-185 651.0 368 86.1
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 8.8e-185 650.6 367 85.8
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 3.3e-184 648.7 446 74.7
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 5.7e-184 647.9 366 86.3
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 4.8e-183 644.8 443 72.9
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 6.3e-183 644.4 445 72.4
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 8.2e-183 644.0 448 72.1
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 1.1e-182 643.7 453 74.6
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 2.4e-182 642.5 448 71.9
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 5.3e-182 641.3 389 81.5
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 5.3e-182 641.3 366 85.8
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 7.0e-182 641.0 372 84.4
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 9.1e-182 640.6 448 73.0
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 1.2e-181 640.2 366 85.2
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 5.9e-181 637.9 461 70.5
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 1.3e-180 636.7 382 81.2
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 5.5e-179 631.3 376 80.3
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 4.0e-177 625.2 382 79.1
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 5.2e-177 624.8 382 79.1
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 4.8e-175 618.2 376 82.2
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 4.2e-171 605.1 375 77.1
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 7.2e-171 604.4 446 71.1
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 8.9e-169 597.4 328 88.1
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 2.4e-166 589.3 383 73.4
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 4.1e-166 588.6 364 76.9
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 5.4e-166 588.2 390 73.8
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 3.5e-157 558.9 344 79.1
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.0e-156 557.4 451 67.4
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 8.6e-156 554.3 394 68.8
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 8.6e-156 554.3 400 70.0
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 8.6e-156 554.3 431 69.1
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.2e-150 535.8 287 90.2
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 1.2e-146 523.9 403 64.5
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 3.4e-144 515.8 491 57.6
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 9.2e-142 507.7 287 84.0
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 7.8e-141 504.6 381 61.9
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 7.1e-134 481.5 366 68.6
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 2.1e-130 469.9 363 62.8
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 4.4e-128 462.2 276 83.7
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 7.6e-128 461.5 339 73.5
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 4.5e-120 435.6 233 90.6
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.9e-119 432.2 297 72.1
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 5.5e-110 402.1 303 68.0
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 1.6e-109 400.6 445 53.5
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.9e-95 353.2 224 74.1
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.6e-88 330.1 256 67.2
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 2.6e-83 313.5 193 76.7
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 2.9e-79 300.1 299 49.2
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 1.5e-75 287.7 161 87.6
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 2.6e-75 287.0 273 58.2
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 1.3e-71 274.6 246 58.5
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 4.7e-69 266.2 355 43.7
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 1.2e-56 224.9 159 74.8
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 4.5e-56 223.0 367 42.0
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 9.8e-51 205.3 136 75.0
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 7.3e-46 189.1 184 58.7
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.0e-44 185.3 113 76.1
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 8.6e-31 139.0 105 66.7
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.5e-27 128.3 83 69.9
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.5e-27 128.3 83 69.9
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 5.1e-23 113.2 129 50.4
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 5.1e-23 113.2 129 50.4
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 4.7e-21 106.7 113 51.3
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 1.4e-20 105.1 71 67.6
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.0e-19 101.3 69 66.7
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.8e-18 97.1 107 51.4
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 4.2e-09 67.0 37 78.4
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 3.5e-08 63.9 117 41.0


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