Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.9e-92 342.4 168 100.0
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 2.2e-56 222.6 147 71.4
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 8.8e-53 210.7 147 68.0
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 1.0e-48 197.2 147 64.6
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 2.5e-47 192.6 150 62.0
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 9.7e-44 180.6 148 60.8
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 9.7e-44 180.6 148 60.8
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 1.1e-42 177.2 150 58.7
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 1.0e-40 170.6 150 56.7
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 6.5e-40 167.9 148 54.1
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 1.5e-39 166.8 150 55.3
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 1.9e-39 166.4 150 57.3
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.6e-38 163.3 150 54.7
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 8.0e-38 161.0 158 52.5
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 1.8e-37 159.8 147 52.4
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 5.2e-37 158.3 141 55.3
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 8.8e-37 157.5 150 54.0
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.5e-36 156.8 148 54.1
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 2.0e-36 156.4 151 52.3
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 4.4e-36 155.2 131 54.2
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 1.3e-35 153.7 148 51.4
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 2.2e-35 152.9 148 48.0
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 2.2e-35 152.9 145 51.0
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.8e-35 152.5 148 51.4
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 6.3e-35 151.4 147 49.0
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 1.1e-34 150.6 149 51.7
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 2.4e-34 149.4 151 50.3
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 5.3e-34 148.3 138 48.6
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 9.1e-34 147.5 147 51.0
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.0e-33 146.4 152 50.0
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.0e-33 146.4 139 52.5
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 2.2e-32 142.9 136 52.9
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 2.9e-32 142.5 152 46.7
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 3.8e-32 142.1 152 48.0
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 1.1e-31 140.6 174 45.4
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 1.9e-31 139.8 150 50.7
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 1.9e-31 139.8 149 49.0
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 2.5e-31 139.4 178 46.6
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 3.2e-31 139.0 149 47.0
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 7.2e-31 137.9 150 48.0
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 1.2e-30 137.1 153 50.3
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.7e-30 136.0 155 44.5
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 2.7e-30 136.0 149 44.3
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 4.7e-30 135.2 149 45.6
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 8.0e-30 134.4 152 46.7
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 4.0e-29 132.1 149 44.3
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 6.8e-29 131.3 152 45.4
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 2.0e-28 129.8 152 45.4
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.0e-28 129.8 148 47.3
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 2.0e-28 129.8 154 42.2
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 5.7e-28 128.3 148 47.3
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 7.5e-28 127.9 148 46.6
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 9.8e-28 127.5 152 44.7
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 1.7e-27 126.7 151 43.0
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 2.8e-27 125.9 152 44.1
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 2.8e-27 125.9 152 43.4
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 3.7e-27 125.6 152 42.1
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 1.8e-26 123.2 152 41.4
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 1.8e-26 123.2 152 41.4
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 5.4e-26 121.7 152 40.8
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 5.4e-26 121.7 152 40.8
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 5.4e-26 121.7 152 40.8
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 7.0e-26 121.3 165 44.2
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.0e-25 119.8 155 40.6
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 2.0e-25 119.8 98 57.1
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 3.5e-25 119.0 131 45.8
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 5.9e-25 118.2 139 43.9
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 2.9e-24 115.9 159 40.3
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.0e-24 115.2 176 39.2
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 2.5e-23 112.8 151 38.4
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 4.2e-23 112.1 177 37.9
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 7.2e-23 111.3 177 37.3
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 9.4e-23 110.9 155 39.4
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 4.7e-22 108.6 155 42.6
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 6.1e-22 108.2 106 49.1
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 1.4e-21 107.1 154 35.1
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 1.2e-20 104.0 154 33.8
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.5e-20 103.6 158 38.0
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 1.7e-19 100.1 154 34.4
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 2.2e-19 99.8 156 34.6
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 3.7e-19 99.0 108 50.9
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 1.4e-18 97.1 150 36.0
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 3.5e-17 92.4 152 34.9
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 3.5e-17 92.4 151 34.4
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.3e-16 90.5 156 34.6
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 1.1e-15 87.4 76 50.0
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 4.3e-15 85.5 68 54.4
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 2.1e-14 83.2 75 54.7
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.8e-13 80.1 151 34.4
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 3.4e-12 75.9 86 45.3
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 4.4e-12 75.5 155 31.0
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 9.8e-12 74.3 72 50.0
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 8.3e-11 71.2 69 47.8
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 7.8e-09 64.7 111 36.0
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 1.3e-08 63.9 166 30.1
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 8.6e-08 61.2 56 50.0
Zm00001eb362710 Zea mays HOM05D007488 ORTHO05D009461 1.2e-06 57.4 112 37.5
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.6e-06 57.0 79 43.0
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.6e-06 57.0 79 43.0


User provided reference genes

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