Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28535 Striga asiatica HOM05D002093 ORTHO05D401204 3.5e-143 511.5 248 100.0
SGA_v2.0_scaffold31G12883 Striga asiatica HOM05D002093 ORTHO05D051380 7.9e-10 68.6 40 80.0
SGA_v2.0_scaffold312G48267 Striga asiatica HOM05D031272 ORTHO05D051380 1.8e-09 67.4 39 79.5
Rhsim08G0100300 Rhododendron simsii HOM05D002093 ORTHO05D003877 3.7e-07 59.7 51 56.9
MSTRG.15388 Avicennia marina HOM05D002093 ORTHO05D003877 6.3e-07 58.9 51 58.8
Actinidia16482 Actinidia chinensis HOM05D002093 ORTHO05D003877 1.1e-06 58.2 55 54.5
Migut.H00432 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.1e-06 58.2 44 63.6
CiPaw.02G008200 Carya illinoinensis HOM05D002093 ORTHO05D003877 1.4e-06 57.8 51 54.9
Migut.K00766 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.4e-06 57.8 56 53.6
MSTRG.2884 Avicennia marina HOM05D002093 ORTHO05D003877 1.8e-06 57.4 51 58.8
VMungo1215G2131 Vigna mungo HOM05D002093 ORTHO05D003877 1.8e-06 57.4 57 49.1
CANSAT01G0818 Cannabis sativa HOM05D002093 ORTHO05D003877 2.4e-06 57.0 51 56.9
Hma1.2p1_1705F.1_g298390 Hydrangea macrophylla HOM05D002093 ORTHO05D003877 2.4e-06 57.0 51 54.9
Glyma.01G186100 Glycine max HOM05D002093 ORTHO05D003877 3.1e-06 56.6 57 49.1
HanXRQChr09g0263831 Helianthus annuus HOM05D002093 ORTHO05D003877 3.1e-06 56.6 45 62.2
Phvul.002G018800 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 3.1e-06 56.6 57 49.1
Sabra05G0112200 Salix brachista HOM05D002093 ORTHO05D003877 3.1e-06 56.6 51 56.9
Dinv39847 Davidia involucrata HOM05D002093 ORTHO05D003877 4.1e-06 56.2 56 51.8
Glyma.11G055900 Glycine max HOM05D002093 ORTHO05D003877 4.1e-06 56.2 58 50.0
TWI73G0884 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 4.1e-06 56.2 51 54.9
Oeu031953.1 Olea europaea HOM05D002093 ORTHO05D003877 5.3e-06 55.8 44 61.4
Cfa004024 Carpinus fangiana HOM05D002093 ORTHO05D003877 7.0e-06 55.5 51 54.9
CiPaw.01G018000 Carya illinoinensis HOM05D002093 ORTHO05D003877 7.0e-06 55.5 51 54.9
Haze_15397 Corylus avellana HOM05D002093 ORTHO05D003877 7.0e-06 55.5 51 54.9
Potri.007G044200 Populus trichocarpa HOM05D002093 ORTHO05D003877 7.0e-06 55.5 51 54.9
Sabra07G0038900 Salix brachista HOM05D002093 ORTHO05D003877 7.0e-06 55.5 51 54.9
CSS0014053 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 9.1e-06 55.1 51 54.9
COL.COLO4_11417 Corchorus olitorius HOM05D002093 ORTHO05D003877 9.1e-06 55.1 44 61.4
THA.LOC104827141 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 9.1e-06 55.1 51 54.9
TWI09G1584 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 9.1e-06 55.1 51 52.9


User provided reference genes

Program Settings