Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 7.9e-144 513.8 275 100.0
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 1.0e-127 460.3 274 88.0
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 1.8e-127 459.5 274 87.2
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 4.4e-126 454.9 271 87.5
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 5.9e-123 444.5 274 83.6
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 1.7e-122 443.0 274 82.1
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 6.5e-122 441.0 278 83.8
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 4.7e-120 434.9 271 83.0
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 3.0e-119 432.2 269 83.3
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 4.0e-119 431.8 271 81.9
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 1.2e-118 430.3 275 80.7
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 5.7e-118 427.9 270 80.7
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 5.7e-118 427.9 270 80.7
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.7e-117 426.4 270 80.7
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 4.8e-117 424.9 271 79.0
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 6.3e-117 424.5 274 79.6
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 6.3e-117 424.5 274 79.6
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 8.3e-117 424.1 291 77.7
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 1.1e-116 423.7 272 80.5
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.4e-116 423.3 270 80.0
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 2.0e-115 419.5 273 78.4
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 2.0e-115 419.5 274 79.6
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 2.7e-115 419.1 285 77.2
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 2.7e-115 419.1 273 79.1
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 4.5e-115 418.3 270 80.7
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 4.5e-115 418.3 270 78.9
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 7.7e-115 417.5 270 80.4
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 1.0e-114 417.2 272 79.0
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.7e-114 416.4 279 78.1
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 8.5e-114 414.1 274 78.8
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.9e-113 412.9 269 79.6
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 2.5e-113 412.5 271 77.9
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 3.2e-113 412.1 270 78.9
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 3.2e-113 412.1 273 80.6
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 5.5e-113 411.4 269 81.0
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 7.2e-113 411.0 271 77.1
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 9.4e-113 410.6 271 80.8
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 1.2e-112 410.2 271 76.8
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 2.7e-112 409.1 270 78.1
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 2.7e-112 409.1 273 78.8
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 3.6e-112 408.7 271 79.0
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 3.6e-112 408.7 272 77.9
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 4.7e-112 408.3 272 78.7
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 6.1e-112 407.9 272 78.7
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 6.1e-112 407.9 271 77.9
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 1.0e-111 407.1 270 77.4
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 1.4e-111 406.8 270 77.4
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.3e-111 406.0 270 77.4
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 2.3e-111 406.0 272 79.0
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 3.0e-111 405.6 273 76.6
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 4.0e-111 405.2 271 78.2
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 5.2e-111 404.8 275 76.7
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 1.2e-110 403.7 274 75.9
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 2.0e-110 402.9 268 78.4
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 2.6e-110 402.5 271 76.4
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 3.4e-110 402.1 272 77.6
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 3.4e-110 402.1 274 76.3
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 4.4e-110 401.7 272 76.8
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 4.4e-110 401.7 269 77.0
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 5.7e-110 401.4 272 76.8
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 5.7e-110 401.4 272 77.2
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 5.7e-110 401.4 274 76.3
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 7.5e-110 401.0 271 76.0
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 1.7e-109 399.8 273 77.7
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 2.8e-109 399.1 272 77.2
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 3.7e-109 398.7 272 76.5
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 3.7e-109 398.7 272 77.2
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 4.9e-109 398.3 273 76.6
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 4.9e-109 398.3 274 74.1
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 1.1e-108 397.1 274 77.4
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 3.1e-108 395.6 273 76.9
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 3.1e-108 395.6 274 73.7
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 4.1e-108 395.2 273 76.9
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 5.4e-108 394.8 273 76.9
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 7.0e-108 394.4 274 77.7
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 9.1e-108 394.0 273 76.2
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 2.0e-107 392.9 271 76.0
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 2.0e-107 392.9 332 66.6
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.3e-106 390.2 269 77.0
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 3.8e-106 388.7 365 61.4
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 6.6e-106 387.9 324 67.3
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 1.5e-105 386.7 274 71.9
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.2e-104 383.6 303 70.3
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 1.4e-103 380.2 247 82.2
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.8e-103 379.8 272 73.9
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 1.8e-103 379.8 272 74.3
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 4.0e-103 378.6 253 78.7
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 5.2e-103 378.3 272 72.8
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 5.2e-103 378.3 274 73.0
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 1.2e-102 377.1 271 73.4
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 1.2e-102 377.1 271 73.4
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.2e-102 377.1 265 72.5
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 2.0e-102 376.3 271 73.1
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 2.0e-102 376.3 271 73.1
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 2.0e-102 376.3 271 73.1
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 2.6e-102 375.9 286 69.9
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 2.6e-102 375.9 271 73.4
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 3.4e-102 375.6 272 72.8
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 5.7e-102 374.8 272 72.8
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 2.9e-101 372.5 272 71.7
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 8.3e-101 370.9 268 71.6
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 1.1e-100 370.5 269 72.5
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 1.4e-100 370.2 269 72.9
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 2.4e-100 369.4 268 71.6
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 4.1e-100 368.6 265 71.7
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 3.5e-99 365.5 269 72.9
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 3.5e-99 365.5 269 72.9
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 3.5e-99 365.5 269 72.9
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 1.3e-98 363.6 273 71.8
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 2.3e-98 362.8 270 68.5
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 1.5e-97 360.1 266 68.8
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 7.3e-97 357.8 314 63.7
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 2.2e-93 346.3 264 68.2
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 4.1e-92 342.0 261 66.7
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.0e-90 337.4 484 46.1
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.3e-90 337.0 484 46.1
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 1.8e-87 326.6 273 59.7
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 9.8e-86 320.9 270 60.4
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 6.0e-83 311.6 269 62.8
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.3e-82 309.7 211 77.7
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 8.6e-82 307.8 261 60.2
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 2.5e-81 306.2 261 59.4
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 7.3e-81 304.7 265 59.6
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 1.8e-79 300.1 261 58.6
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 4.6e-75 285.4 250 62.0
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 1.1e-73 280.8 261 54.0
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 1.6e-72 276.9 252 61.1
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 2.1e-72 276.6 278 52.5
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 8.9e-71 271.2 279 55.2
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 1.2e-70 270.8 277 56.0
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 2.6e-70 269.6 255 60.4
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 3.4e-70 269.2 256 60.5
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 1.7e-69 266.9 161 85.7
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 6.4e-69 265.0 279 55.2
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 2.4e-68 263.1 277 55.2
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 4.2e-68 262.3 279 55.2
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 7.8e-67 258.1 262 51.5
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 3.9e-66 255.8 256 59.4
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.1e-66 255.4 293 54.3
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 7.6e-62 241.5 223 61.0
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 3.8e-61 239.2 270 52.6
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 2.1e-59 233.4 277 52.3
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 3.5e-59 232.6 262 50.4
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 3.9e-58 229.2 253 53.4
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 7.3e-57 224.9 137 81.8
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-49 201.1 248 48.8
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 2.8e-48 196.4 131 77.1
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-47 194.5 267 47.9
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 2.6e-46 189.9 131 74.0
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 5.5e-44 182.2 136 72.1
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 5.1e-42 175.6 411 35.3
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.5e-41 174.1 161 62.7
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.3e-41 172.6 148 62.8
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 3.7e-40 169.5 136 64.0
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.4e-39 167.5 97 88.7
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 1.2e-38 164.5 227 45.8
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 6.5e-37 158.7 129 65.9
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.6e-35 154.1 100 80.0
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 9.0e-31 138.3 141 56.7
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 9.4e-28 128.3 136 52.2
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 1.8e-26 124.0 257 33.9
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 5.1e-26 122.5 289 28.4
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 6.7e-26 122.1 260 32.3
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 6.9e-23 112.1 70 85.7
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 1.0e-21 108.2 70 77.1
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.8e-21 106.3 150 44.7
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 2.0e-17 94.0 111 50.5
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 5.7e-17 92.4 69 62.3
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 7.4e-17 92.0 59 78.0
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 2.8e-16 90.1 70 70.0
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 3.7e-16 89.7 52 88.5
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 4.8e-16 89.4 52 86.5
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 4.8e-16 89.4 52 86.5
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 1.1e-15 88.2 52 86.5
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 2.4e-15 87.0 52 86.5
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 4.1e-15 86.3 64 68.8
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 2.0e-14 84.0 50 84.0
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 5.9e-14 82.4 79 54.4
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 7.7e-14 82.0 69 59.4
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 1.3e-13 81.3 53 71.7
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 1.3e-13 81.3 69 59.4
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.3e-13 81.3 69 59.4
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 8.5e-13 78.6 69 56.5
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-09 66.6 55 56.4
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 3.1e-07 60.1 40 75.0


User provided reference genes

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