Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28512 Striga asiatica HOM05D002453 ORTHO05D406013 2.1e-115 419.1 217 100.0
SGA_v2.0_scaffold452G51850 Striga asiatica HOM05D002453 ORTHO05D403205 1.6e-35 153.7 111 72.1
SGA_v2.0_scaffold181G39749 Striga asiatica HOM05D002453 ORTHO05D008746 1.2e-33 147.5 115 66.1
SGA_v2.0_scaffold5G02574 Striga asiatica HOM05D002453 ORTHO05D405306 3.1e-26 122.9 74 73.0
SGA_v2.0_scaffold7G04131 Striga asiatica HOM05D000563 ORTHO05D402747 4.1e-26 122.5 74 74.3
SGA_v2.0_scaffold152G36837 Striga asiatica HOM05D002453 ORTHO05D401796 6.5e-16 88.6 51 78.4
Aqoxy1G00843 Aquilegia oxysepala HOM05D000563 ORTHO05D000536 1.2e-06 57.8 72 37.5
Glyma.11G222900 Glycine max HOM05D000563 ORTHO05D000536 2.1e-06 57.0 182 28.6
PGSC0003DMG400022701 Solanum tuberosum HOM05D000563 ORTHO05D000536 2.1e-06 57.0 63 42.9
CAN.G651.14 Capsicum annuum HOM05D000563 ORTHO05D000536 2.7e-06 56.6 63 42.9
PSO478G2840 Papaver somniferum HOM05D000563 ORTHO05D000536 2.7e-06 56.6 65 47.7
Solyc01g009060.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 2.7e-06 56.6 63 42.9
Sopen01g004550 Solanum pennellii HOM05D000563 ORTHO05D000536 2.7e-06 56.6 63 42.9
Nitab4.5_0000428g0100 Nicotiana tabacum HOM05D000563 ORTHO05D000536 3.6e-06 56.2 63 42.9
Nitab4.5_0002300g0090 Nicotiana tabacum HOM05D000563 ORTHO05D000536 3.6e-06 56.2 63 42.9
Nitab4.5_0002567g0100 Nicotiana tabacum HOM05D000563 ORTHO05D000536 3.6e-06 56.2 63 42.9
Nitab4.5_0008289g0020 Nicotiana tabacum HOM05D000563 ORTHO05D000536 3.6e-06 56.2 63 42.9
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 3.6e-06 56.2 63 42.9
Ca_08308_v3 Cicer arietinum L. HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Eucgr.J00615 Eucalyptus grandis HOM05D000563 ORTHO05D000536 4.7e-06 55.8 64 43.8
Glyma.16G036400 Glycine max HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Glyma.19G116300 Glycine max HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Lj1g0011818 Lotus japonicus HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Medtr7g086500 Medicago truncatula HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
PSO339G6203 Papaver somniferum HOM05D000563 ORTHO05D000536 4.7e-06 55.8 64 42.2
Peaxi162Scf00978g00217 Petunia axillaris HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Phvul.001G104500 Phaseolus vulgaris HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Psat3g087200 Pisum sativum HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Sed0014760 Sechium edule HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Solyc11g072070.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Sopen11g029720 Solanum pennellii HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
PGSC0003DMG400027397 Solanum tuberosum HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
TPR.G17877 Trifolium pratense HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
VMungo1383G0126 Vigna mungo HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
Zm00001eb060340 Zea mays HOM05D000563 ORTHO05D000536 4.7e-06 55.8 63 42.9
MSTRG.17653 Avicennia marina HOM05D000563 ORTHO05D000536 6.1e-06 55.5 63 41.3
Haze_23635 Corylus avellana HOM05D000563 ORTHO05D000536 6.1e-06 55.5 70 38.6
Hund10751 Selenicereus undatus HOM05D000563 ORTHO05D000536 6.1e-06 55.5 63 41.3
TWI79G0882 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 6.1e-06 55.5 63 41.3
Dinv11353 Davidia involucrata HOM05D000563 ORTHO05D000536 7.9e-06 55.1 63 41.3
Migut.D00709 Erythranthe guttata HOM05D000563 ORTHO05D000536 7.9e-06 55.1 63 41.3
Gohir.A06G166100 Gossypium hirsutum HOM05D000563 ORTHO05D000536 7.9e-06 55.1 72 38.9
Gohir.D06G171500 Gossypium hirsutum HOM05D000563 ORTHO05D000536 7.9e-06 55.1 72 38.9
Gorai.010G200500 Gossypium raimondii HOM05D000563 ORTHO05D000536 7.9e-06 55.1 72 38.9
Manes.07G119600 Manihot esculenta HOM05D000563 ORTHO05D000536 7.9e-06 55.1 63 42.9
Peaxi162Scf00050g02418 Petunia axillaris HOM05D000563 ORTHO05D000536 7.9e-06 55.1 63 41.3


User provided reference genes

Program Settings