Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 0.0e+00 1323.9 651 100.0
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 7.0e-207 724.5 731 54.2
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 1.0e-189 667.5 728 51.0
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 1.1e-188 664.1 736 50.3
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.4e-154 550.8 669 48.1
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 2.0e-153 547.0 663 45.9
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 1.1e-151 541.2 759 43.5
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 4.5e-145 519.2 740 41.9
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 3.8e-144 516.2 666 45.3
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 3.2e-143 513.1 744 41.9
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 9.3e-143 511.5 737 42.9
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 2.7e-142 510.0 730 42.3
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 1.1e-140 504.6 742 41.0
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 9.6e-140 501.5 731 41.5
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 1.6e-139 500.7 741 42.5
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 1.1e-138 498.0 743 40.9
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.1e-138 498.0 746 42.0
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 1.4e-138 497.7 724 40.9
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 1.4e-138 497.7 740 40.8
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 6.9e-138 495.4 762 39.2
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 1.5e-137 494.2 723 42.9
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 4.5e-137 492.7 715 42.4
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 5.8e-137 492.3 740 42.2
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 1.0e-136 491.5 730 41.2
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.0e-136 491.5 718 42.1
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 1.3e-136 491.1 664 42.8
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 2.2e-136 490.3 735 41.6
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.2e-136 490.3 730 41.4
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.9e-135 487.3 735 40.0
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 1.8e-133 480.7 762 39.2
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 1.1e-132 478.0 738 39.4
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 3.3e-132 476.5 719 39.9
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 3.3e-132 476.5 703 41.0
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 2.2e-131 473.8 737 38.9
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 3.7e-131 473.0 716 40.6
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 6.3e-131 472.2 717 40.6
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 8.2e-131 471.9 737 38.4
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 1.8e-130 470.7 743 39.3
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.4e-130 470.3 719 40.5
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 2.4e-130 470.3 737 38.5
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 3.1e-130 469.9 689 41.1
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 4.1e-130 469.5 718 40.4
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 2.0e-129 467.2 735 38.4
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 1.7e-128 464.2 754 39.0
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.7e-128 464.2 738 38.8
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 2.2e-128 463.8 734 39.9
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 3.8e-128 463.0 743 37.8
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 5.0e-128 462.6 748 38.8
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.4e-127 461.1 734 39.9
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 1.4e-127 461.1 754 37.7
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 2.5e-127 460.3 735 38.5
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 1.2e-126 458.0 754 37.9
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 1.6e-126 457.6 743 38.6
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 1.6e-126 457.6 665 42.0
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 2.3e-125 453.8 664 41.0
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 8.8e-125 451.8 720 39.6
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 2.5e-124 450.3 664 41.0
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 6.3e-123 445.7 647 42.3
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 1.1e-122 444.9 738 38.8
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 1.8e-122 444.1 729 38.4
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 3.4e-121 439.9 738 38.1
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 5.9e-121 439.1 728 37.9
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 5.9e-121 439.1 742 38.7
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 7.7e-121 438.7 728 37.5
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 7.7e-121 438.7 728 37.5
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 1.0e-120 438.3 681 39.6
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 1.3e-120 438.0 794 35.9
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 1.4e-119 434.5 788 35.8
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 7.9e-118 428.7 720 37.6
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 7.9e-118 428.7 722 38.9
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 5.1e-117 426.0 548 44.0
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.5e-116 424.5 728 37.6
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 1.8e-114 417.5 725 38.8
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 8.5e-112 408.7 728 35.9
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 1.1e-111 408.3 636 39.2
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 2.5e-111 407.1 743 37.3
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.3e-109 400.6 552 42.6
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 3.0e-109 400.2 599 40.6
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 3.9e-109 399.8 652 38.7
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 9.7e-108 395.2 547 41.9
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 2.2e-107 394.0 646 39.2
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 8.2e-107 392.1 781 35.2
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 1.1e-106 391.7 545 42.9
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.8e-106 391.0 740 36.6
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 1.8e-106 391.0 731 36.0
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 2.4e-106 390.6 675 36.9
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 7.7e-105 385.6 546 41.9
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 4.2e-103 379.8 609 39.4
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 2.7e-102 377.1 610 39.0
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 9.7e-100 368.6 556 38.7
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 1.6e-97 361.3 549 40.1
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 4.5e-97 359.8 555 38.6
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 1.5e-95 354.8 552 38.6
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 3.6e-94 350.1 381 49.9
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 4.0e-93 346.7 762 32.2
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 2.0e-92 344.4 557 38.4
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 5.7e-92 342.8 552 38.2
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.8e-90 337.8 669 35.0
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 7.5e-84 315.8 496 40.3
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 8.3e-83 312.4 630 34.0
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 3.8e-80 303.5 431 41.5
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 3.6e-78 297.0 679 34.2
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 4.9e-75 286.6 456 40.4
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 1.5e-71 275.0 601 33.6
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.1e-63 248.8 623 31.6
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 7.8e-57 226.1 495 34.1
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 3.1e-53 214.2 392 33.9
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 1.2e-52 212.2 471 31.6
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 1.7e-51 208.4 170 61.2
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 2.4e-50 204.5 379 36.9
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 1.6e-46 191.8 249 39.8
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 4.0e-45 187.2 235 46.4
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.5e-44 185.3 147 57.8
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-37 161.0 254 35.8
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.4e-34 152.1 210 41.9
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 6.7e-32 143.3 235 40.0
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 1.1e-29 136.0 230 37.8
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 5.3e-29 133.7 141 51.8
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 1.3e-22 112.5 129 48.1
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 3.4e-20 104.4 260 30.8
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 7.9e-17 93.2 195 30.3
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 1.3e-16 92.4 192 31.2
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 1.5e-15 89.0 176 32.4
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 1.5e-15 89.0 176 32.4
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 1.3e-11 75.9 76 47.4
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 2.1e-09 68.6 166 31.3
BcaB05g24338 Brassica carinata HOM05D005891 ORTHO05D007214 8.2e-06 56.6 70 44.3


User provided reference genes

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