Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.8e-117 426.0 232 100.0
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 2.1e-73 279.6 230 70.4
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.1e-48 197.6 236 55.9
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 5.4e-45 185.3 258 49.6
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 6.7e-35 151.8 234 50.9
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.8e-27 127.1 218 48.2
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.7e-22 110.5 242 40.1
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.2e-22 110.2 237 42.2
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.0e-22 109.0 245 38.8
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.4e-21 107.5 240 40.4
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 2.5e-21 106.7 246 39.4
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.0e-19 101.3 174 46.6
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 1.0e-19 101.3 257 36.2
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.8e-19 100.5 250 38.4
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 5.1e-19 99.0 256 40.6
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.5e-18 97.4 175 40.6
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 7.4e-18 95.1 258 35.7
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 7.4e-18 95.1 229 36.7
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 7.4e-18 95.1 184 40.8
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 7.4e-18 95.1 185 40.0
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 4.8e-17 92.4 183 41.5
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 4.8e-17 92.4 174 37.9
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.1e-16 89.7 169 36.7
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 9.1e-16 88.2 169 36.7
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 9.1e-16 88.2 169 36.7
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.2e-15 87.8 161 42.9
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.6e-15 86.7 266 33.1
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 3.4e-15 86.3 148 45.9
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 3.4e-15 86.3 124 46.0
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 7.7e-15 85.1 244 35.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 2.9e-14 83.2 156 44.9
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 5.0e-14 82.4 218 36.2
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 8.5e-14 81.6 217 35.0
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 1.9e-13 80.5 257 35.8
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 4.2e-13 79.3 210 35.7
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 4.2e-13 79.3 156 40.4
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 9.4e-13 78.2 253 33.6
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 9.4e-13 78.2 259 34.0
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 1.6e-12 77.4 239 33.5
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.1e-12 77.0 262 34.7
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 2.1e-12 77.0 169 40.2
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 2.7e-12 76.6 260 35.0
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.7e-12 75.9 258 33.7
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 6.1e-12 75.5 194 38.1
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 7.9e-12 75.1 282 32.3
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 7.9e-12 75.1 252 34.5
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.0e-11 74.7 251 33.5
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.8e-11 73.9 254 32.7
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 2.3e-11 73.6 266 34.2
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.9e-11 72.8 128 39.8
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 3.9e-11 72.8 133 45.1
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 6.7e-11 72.0 229 31.9
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 6.7e-11 72.0 228 32.0
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 8.8e-11 71.6 235 33.2
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 8.8e-11 71.6 232 30.6
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 8.8e-11 71.6 73 56.2
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 8.8e-11 71.6 215 34.4
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 8.8e-11 71.6 195 35.9
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.5e-10 70.9 233 32.2
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 2.6e-10 70.1 193 32.6
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.3e-10 69.7 132 37.9
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 4.4e-10 69.3 189 38.1
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 4.4e-10 69.3 72 55.6
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 9.7e-10 68.2 228 31.1
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 3.7e-09 66.2 246 30.5
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 3.7e-09 66.2 248 32.7
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.4e-08 64.3 120 41.7
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.8e-08 63.9 208 32.7
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 2.4e-08 63.5 227 33.0
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 4.1e-08 62.8 188 34.0
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 4.1e-08 62.8 181 34.8
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 7.0e-08 62.0 235 31.9
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 9.1e-08 61.6 132 36.4
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.2e-07 61.2 291 31.3
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 2.0e-07 60.5 228 32.0
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 2.6e-07 60.1 154 33.8
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 4.5e-07 59.3 228 32.9
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 5.9e-07 58.9 219 29.2
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 1.0e-06 58.2 234 32.1
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.3e-06 57.8 225 30.7
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 1.7e-06 57.4 81 46.9
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 1.7e-06 57.4 205 32.7
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 2.2e-06 57.0 238 33.6
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 3.8e-06 56.2 235 32.3
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.5e-06 55.5 60 43.3
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.5e-06 55.5 60 43.3
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 8.5e-06 55.1 68 41.2


User provided reference genes

Program Settings