Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 1.0e-111 406.8 201 100.0
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 1.7e-66 256.5 194 67.5
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 4.8e-66 255.0 206 65.0
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 5.4e-65 251.5 201 61.2
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 2.9e-63 245.7 201 65.2
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 2.9e-63 245.7 197 63.5
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 3.8e-63 245.4 204 62.7
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 8.6e-63 244.2 180 68.3
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.5e-62 243.4 178 66.9
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 9.5e-62 240.7 199 60.3
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 1.6e-61 240.0 177 68.4
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 2.1e-61 239.6 185 65.4
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 6.1e-61 238.0 186 65.1
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 8.0e-61 237.7 194 63.4
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 8.0e-61 237.7 190 64.2
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 1.0e-60 237.3 195 62.1
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 1.4e-60 236.9 195 60.5
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 2.3e-60 236.1 190 63.7
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 2.3e-60 236.1 185 64.9
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 2.3e-60 236.1 180 67.2
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 1.2e-59 233.8 190 63.7
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 1.2e-59 233.8 195 62.1
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 1.5e-59 233.4 190 62.6
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 2.6e-59 232.6 192 59.9
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 3.4e-59 232.3 194 58.8
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 2.8e-58 229.2 183 65.0
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 2.8e-58 229.2 186 64.0
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 2.8e-58 229.2 190 63.7
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 1.1e-57 227.3 187 62.0
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 1.4e-57 226.9 161 65.2
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 3.1e-57 225.7 194 60.8
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 7.0e-57 224.6 189 62.4
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 7.0e-57 224.6 194 60.3
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 4.5e-56 221.9 194 59.8
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 5.9e-56 221.5 178 61.2
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 7.8e-56 221.1 191 59.7
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 1.3e-55 220.3 181 61.3
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 1.3e-55 220.3 182 59.3
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 1.7e-55 219.9 192 58.3
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 1.7e-55 219.9 148 70.9
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 2.9e-55 219.2 183 60.1
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 3.8e-55 218.8 182 60.4
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 3.8e-55 218.8 192 59.4
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.1e-54 217.2 196 58.2
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.9e-54 216.5 178 61.2
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 2.5e-54 216.1 180 62.2
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 5.6e-54 214.9 174 62.6
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 7.3e-54 214.5 178 61.8
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 7.3e-54 214.5 187 59.9
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.2e-53 213.8 192 56.8
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 1.6e-53 213.4 192 57.3
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 1.6e-53 213.4 180 60.0
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 2.8e-53 212.6 166 62.0
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 4.7e-53 211.8 163 63.8
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 8.0e-53 211.1 171 62.0
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 2.3e-52 209.5 169 59.8
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 3.1e-52 209.1 195 57.9
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 4.0e-52 208.8 178 59.6
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 5.2e-52 208.4 160 61.2
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 1.2e-51 207.2 189 55.0
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 1.5e-51 206.8 185 54.6
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 1.5e-51 206.8 199 57.3
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 3.4e-51 205.7 188 53.7
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 3.4e-51 205.7 178 57.3
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 5.8e-51 204.9 178 59.0
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.3e-50 203.8 160 58.8
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.2e-50 203.0 160 57.5
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 2.9e-50 202.6 197 54.3
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 1.1e-49 200.7 169 62.1
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.2e-49 199.1 192 55.7
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 5.4e-49 198.4 155 61.3
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 1.6e-48 196.8 162 61.1
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 2.7e-48 196.1 172 58.1
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 2.7e-48 196.1 158 60.1
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 7.8e-48 194.5 177 56.5
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 1.0e-47 194.1 190 54.2
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 1.3e-47 193.7 189 55.6
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 2.3e-47 193.0 171 59.6
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.0e-47 192.6 197 53.3
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 3.9e-47 192.2 171 59.1
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 3.9e-47 192.2 190 55.3
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 5.0e-47 191.8 170 58.2
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 5.0e-47 191.8 170 58.2
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 5.0e-47 191.8 170 58.2
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 1.9e-46 189.9 177 55.9
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 2.5e-46 189.5 187 55.6
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 3.3e-46 189.1 140 64.3
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 5.6e-46 188.3 162 58.6
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 5.6e-46 188.3 144 60.4
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.3e-46 188.0 162 58.6
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 7.3e-46 188.0 185 54.6
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 1.6e-45 186.8 142 62.0
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 3.1e-44 182.6 188 52.1
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.2e-43 180.6 186 51.1
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 2.6e-43 179.5 150 57.3
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 4.4e-43 178.7 177 47.5
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 1.5e-38 163.7 128 67.2
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 7.3e-38 161.4 130 63.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 5.2e-36 155.2 115 60.0
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 7.5e-35 151.4 123 65.0
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 3.7e-34 149.1 159 47.8
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.2e-33 146.0 106 67.0
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 5.4e-33 145.2 93 73.1
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 6.0e-32 141.7 118 57.6
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 2.3e-31 139.8 102 66.7
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.6e-29 133.7 147 44.9
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 2.3e-23 113.2 143 45.5
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 9.0e-20 101.3 97 48.5
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 6.0e-16 88.6 152 38.2
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 7.8e-16 88.2 118 46.6
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 3.3e-14 82.8 77 54.5
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 2.8e-13 79.7 152 32.9
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 6.4e-10 68.6 62 45.2
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 5.1e-07 58.9 116 27.6


User provided reference genes

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