Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 2.9e-82 308.5 158 100.0
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 5.5e-57 224.6 168 69.0
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 1.1e-52 210.3 164 71.3
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.4e-47 193.4 151 64.9
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 1.3e-37 160.2 149 60.4
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.4e-36 156.8 132 63.6
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 1.8e-36 156.4 159 57.9
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 5.4e-36 154.8 175 53.7
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 5.4e-36 154.8 158 57.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 7.0e-36 154.5 132 65.2
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 9.2e-36 154.1 108 70.4
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 9.2e-36 154.1 173 53.8
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 9.2e-36 154.1 173 53.2
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.6e-35 153.3 112 67.0
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 1.6e-35 153.3 116 68.1
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 1.6e-35 153.3 109 69.7
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.7e-35 152.5 169 50.3
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.5e-35 152.1 158 55.1
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 5.9e-35 151.4 110 70.0
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 7.7e-35 151.0 109 72.5
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.0e-34 150.6 167 55.7
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 1.3e-34 150.2 169 50.3
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 1.7e-34 149.8 104 69.2
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 1.7e-34 149.8 96 74.0
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.3e-34 149.4 169 50.3
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 6.6e-34 147.9 103 69.9
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 8.6e-34 147.5 132 62.1
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 8.6e-34 147.5 135 60.0
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 1.1e-33 147.1 151 53.0
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 1.9e-33 146.4 97 73.2
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.9e-33 146.4 148 63.5
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.9e-33 146.4 96 74.0
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 2.5e-33 146.0 166 49.4
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 2.5e-33 146.0 95 73.7
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 3.3e-33 145.6 95 73.7
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 4.3e-33 145.2 104 69.2
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 7.3e-33 144.4 106 66.0
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.6e-32 143.3 140 53.6
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 2.8e-32 142.5 157 47.1
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 2.8e-32 142.5 170 45.9
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 3.6e-32 142.1 107 62.6
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 4.7e-32 141.7 99 70.7
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 8.0e-32 141.0 89 74.2
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 8.0e-32 141.0 111 66.7
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.0e-31 140.6 102 68.6
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 1.4e-31 140.2 135 57.0
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 1.8e-31 139.8 146 54.8
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 1.8e-31 139.8 105 63.8
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 2.3e-31 139.4 125 56.8
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 1.2e-30 137.1 109 62.4
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.0e-30 136.3 109 60.6
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 2.6e-30 136.0 96 66.7
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.6e-30 136.0 109 59.6
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 5.7e-30 134.8 105 64.8
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 9.8e-30 134.0 133 59.4
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 3.7e-29 132.1 89 65.2
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 4.9e-29 131.7 102 62.7
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 6.4e-29 131.3 110 59.1
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 6.4e-29 131.3 89 64.0
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 8.3e-29 131.0 95 70.5
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 1.1e-28 130.6 96 63.5
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 5.4e-28 128.3 106 60.4
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 2.0e-27 126.3 132 52.3
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 2.7e-27 125.9 121 55.4
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 2.7e-27 125.9 104 59.6
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 3.5e-27 125.6 125 56.0
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 3.5e-27 125.6 105 61.0
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 3.5e-27 125.6 105 61.0
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 3.5e-27 125.6 105 61.0
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 3.5e-27 125.6 121 54.5
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 3.5e-27 125.6 130 53.8
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 3.5e-27 125.6 96 62.5
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 4.6e-27 125.2 124 60.5
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 4.6e-27 125.2 125 56.0
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 4.6e-27 125.2 125 56.0
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 1.0e-26 124.0 125 56.0
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 1.0e-26 124.0 121 54.5
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 2.3e-26 122.9 101 62.4
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 3.9e-26 122.1 95 65.3
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 2.5e-25 119.4 88 68.2
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 7.3e-25 117.9 76 73.7
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 7.3e-25 117.9 90 65.6
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 4.7e-24 115.2 81 70.4
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 6.8e-23 111.3 110 56.4
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 8.9e-23 110.9 102 54.9
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.4e-22 108.6 169 42.6
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.4e-22 108.6 169 42.6
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.2e-19 100.5 129 44.2
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 7.8e-19 97.8 126 43.7
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 3.9e-18 95.5 106 44.3
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 9.5e-17 90.9 67 61.2
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 2.1e-16 89.7 60 68.3
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 2.3e-15 86.3 68 64.7
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 4.0e-15 85.5 76 56.6
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 5.2e-15 85.1 75 56.0
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 6.8e-15 84.7 63 66.7
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 8.9e-15 84.3 105 39.0
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 1.7e-13 80.1 108 46.3
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 1.7e-13 80.1 70 61.4
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 2.9e-13 79.3 101 40.6
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 2.9e-13 79.3 74 58.1
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 3.7e-13 79.0 68 60.3
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 7.1e-12 74.7 71 50.7
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.0e-10 70.9 71 60.6
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 2.3e-10 69.7 80 50.0
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 3.3e-09 65.9 118 37.3


User provided reference genes

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