Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.6e-214 747.3 362 100.0
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.3e-194 682.9 362 90.1
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.4e-193 678.7 362 89.8
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.2e-193 677.9 362 88.7
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.6e-192 674.5 359 88.9
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 3.0e-191 671.8 362 87.8
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 8.7e-191 670.2 362 87.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 8.7e-191 670.2 362 88.4
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.9e-190 669.1 362 87.3
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.5e-190 668.7 362 87.8
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.3e-190 667.9 358 88.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 9.6e-190 666.8 362 86.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 9.6e-190 666.8 362 86.5
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-189 666.4 362 86.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-189 666.4 362 86.7
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.3e-189 666.4 362 87.3
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.1e-189 665.6 362 88.1
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.8e-189 665.2 360 88.3
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.4e-188 662.9 362 86.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.2e-187 659.8 362 85.9
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.6e-187 658.7 362 86.7
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 3.4e-187 658.3 362 86.2
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 4.5e-187 657.9 360 85.8
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 5.8e-187 657.5 362 85.4
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 5.8e-187 657.5 362 85.1
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.0e-186 656.8 362 84.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.3e-186 656.4 362 85.4
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.8e-186 654.8 362 85.6
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.5e-186 654.1 360 85.0
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.4e-185 652.9 357 86.3
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.4e-185 652.9 362 85.6
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.2e-185 651.7 357 86.0
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 3.2e-185 651.7 362 84.3
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.2e-184 649.8 362 85.1
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.2e-184 649.8 360 86.4
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.6e-184 649.4 362 85.4
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.1e-184 649.0 360 84.7
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-184 649.0 362 85.6
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.1e-184 649.0 362 84.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 2.1e-184 649.0 362 85.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.7e-184 648.7 372 84.1
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 4.6e-184 647.9 362 84.5
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 7.9e-184 647.1 362 86.2
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.8e-183 646.0 362 84.0
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 2.3e-183 645.6 362 83.4
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 3.0e-183 645.2 361 84.8
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.0e-183 645.2 361 84.8
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.9e-183 644.8 362 83.7
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.7e-183 644.0 361 84.5
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 6.7e-183 644.0 358 84.4
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 1.1e-182 643.3 358 84.9
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 3.3e-182 641.7 397 78.8
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.4e-182 640.6 402 78.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 9.6e-182 640.2 361 84.2
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.3e-181 639.8 363 84.0
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 2.1e-181 639.0 361 85.0
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.3e-181 637.5 361 83.9
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.8e-180 636.0 358 84.1
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.1e-180 635.2 362 83.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 6.9e-180 634.0 362 82.3
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 9.0e-180 633.6 362 82.9
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.5e-179 632.9 361 81.4
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.9e-177 625.9 388 78.1
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 9.3e-177 623.6 361 81.7
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.2e-176 623.2 418 74.4
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.6e-176 622.9 359 81.9
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.6e-176 622.9 342 86.0
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 2.7e-176 622.1 359 81.6
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 7.9e-176 620.5 359 80.8
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.8e-175 619.4 361 80.3
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.3e-175 619.0 359 81.1
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.3e-175 619.0 362 81.5
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.9e-174 615.9 362 79.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.9
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.9
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.9
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.7
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 3.7e-173 611.7 359 79.7
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 6.3e-173 610.9 359 79.7
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.1e-172 608.6 429 70.9
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 4.1e-172 608.2 358 79.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 4.1e-172 608.2 357 80.7
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 5.3e-172 607.8 387 75.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 6.9e-172 607.4 359 80.5
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-171 605.5 359 80.2
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.4e-171 605.1 359 80.2
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 7.7e-171 604.0 361 80.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.3e-170 603.2 358 79.1
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.7e-170 602.8 359 79.9
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 5.0e-170 601.3 359 79.7
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.1e-169 600.1 358 78.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.0e-167 593.6 366 75.4
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 3.0e-167 592.0 366 74.6
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 7.4e-166 587.4 315 89.2
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.0e-163 579.3 362 78.2
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.4e-158 561.6 358 73.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.1e-156 557.0 336 78.9
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.4e-156 556.6 315 84.1
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.8e-156 556.2 303 87.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-150 536.2 307 84.4
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.5e-147 525.0 404 66.6
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.9e-146 522.3 358 69.3
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 3.8e-146 521.9 358 69.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.5e-145 520.0 359 68.8
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.3e-141 506.9 353 72.2
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.8e-140 503.1 359 66.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 6.3e-133 478.0 366 68.0
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 8.3e-133 477.6 362 68.2
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.2e-128 463.8 368 62.5
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.8e-127 459.9 253 88.1
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 2.3e-127 459.5 241 92.9
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.7e-114 416.8 240 82.5
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.6e-107 393.7 211 84.8
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.4e-100 369.8 205 86.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.7e-75 286.6 181 79.0
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.5e-65 254.2 152 75.0
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 9.3e-60 235.0 161 68.9
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-54 218.0 126 79.4
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.6e-54 216.9 117 79.5
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.8e-47 194.1 346 37.3
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 2.4e-47 193.7 208 53.4
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 7.7e-38 162.2 98 81.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 7.5e-33 145.6 117 65.8
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.0e-26 125.2 59 93.2
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.7e-24 117.9 112 58.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 3.6e-19 100.1 79 65.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.1e-15 88.6 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 4.5e-14 83.2 37 94.6
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.8e-13 80.1 163 36.8
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 4.0e-10 70.1 305 25.6


User provided reference genes

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