Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 1.8e-102 375.9 197 100.0
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 8.1e-58 227.6 204 62.3
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 4.3e-51 205.3 200 57.0
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 1.0e-44 184.1 206 51.5
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 3.9e-44 182.2 197 51.8
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 5.1e-44 181.8 202 49.0
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 4.3e-43 178.7 198 49.5
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 5.7e-43 178.3 202 52.5
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 2.1e-42 176.4 208 50.5
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 2.1e-42 176.4 200 52.0
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 4.8e-42 175.3 196 48.0
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 1.5e-40 170.2 196 50.5
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 2.0e-40 169.9 198 50.5
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 2.2e-39 166.4 189 54.0
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 1.4e-38 163.7 204 49.5
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 1.9e-38 163.3 193 51.8
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 4.2e-38 162.2 183 51.4
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 5.5e-38 161.8 195 51.3
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 9.3e-38 161.0 194 49.5
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 1.6e-37 160.2 201 48.3
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 2.1e-37 159.8 201 48.3
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 2.1e-37 159.8 192 46.9
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 2.7e-37 159.5 198 47.5
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 3.5e-37 159.1 190 46.3
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 4.6e-37 158.7 194 49.5
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 4.6e-37 158.7 198 50.5
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 6.1e-37 158.3 205 45.9
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 6.1e-37 158.3 186 47.8
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 1.0e-36 157.5 200 45.5
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.0e-36 157.5 194 48.5
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.0e-36 157.5 198 50.0
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 1.8e-36 156.8 207 46.9
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 3.9e-36 155.6 191 44.0
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 5.1e-36 155.2 187 46.5
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 6.7e-36 154.8 191 49.7
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.9e-35 153.3 168 51.2
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 2.5e-35 152.9 191 42.9
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 3.3e-35 152.5 185 46.5
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 3.3e-35 152.5 205 42.9
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 3.3e-35 152.5 188 46.8
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 7.4e-35 151.4 201 43.3
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 9.7e-35 151.0 202 45.5
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 1.3e-34 150.6 206 45.6
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 1.6e-34 150.2 205 45.9
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 2.8e-34 149.4 192 48.4
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 6.3e-34 148.3 202 43.1
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 8.2e-34 147.9 192 43.8
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.1e-33 147.5 203 43.8
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 2.4e-33 146.4 185 43.2
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.1e-33 146.0 204 46.1
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.1e-33 146.0 203 45.3
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 3.1e-33 146.0 197 42.6
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 5.3e-33 145.2 197 44.2
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 6.9e-33 144.8 202 44.6
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 9.0e-33 144.4 202 46.0
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 9.0e-33 144.4 202 45.0
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 9.0e-33 144.4 202 45.0
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 1.2e-32 144.1 201 45.8
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.2e-32 144.1 201 45.8
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.2e-32 144.1 201 45.8
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.2e-32 144.1 199 44.2
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.2e-32 144.1 199 44.2
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 2.6e-32 142.9 197 43.7
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 3.4e-32 142.5 208 46.6
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 5.9e-32 141.7 204 45.1
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 1.0e-31 141.0 201 44.8
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 2.2e-31 139.8 187 48.1
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 5.0e-31 138.7 189 44.4
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 6.5e-31 138.3 203 44.3
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 8.5e-31 137.9 215 42.3
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 1.1e-30 137.5 197 45.7
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 1.9e-30 136.7 211 42.2
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 7.2e-30 134.8 190 44.2
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 1.2e-29 134.0 206 42.2
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 1.6e-29 133.7 199 43.2
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 2.1e-29 133.3 205 41.0
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 3.6e-29 132.5 183 43.2
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 4.6e-29 132.1 135 56.3
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 1.4e-28 130.6 200 44.0
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 1.8e-28 130.2 202 43.1
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 2.3e-28 129.8 187 41.7
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 3.0e-28 129.4 197 41.1
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 5.1e-28 128.6 202 43.6
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 8.8e-28 127.9 191 43.5
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 8.8e-28 127.9 199 42.2
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 1.1e-27 127.5 158 48.1
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.1e-27 127.5 190 44.2
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 1.5e-27 127.1 193 41.5
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 1.5e-27 127.1 201 41.3
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.5e-27 127.1 202 41.1
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 2.5e-27 126.3 192 45.3
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 3.3e-27 125.9 202 40.1
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 5.7e-27 125.2 181 42.0
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 7.4e-27 124.8 154 48.7
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 7.4e-27 124.8 186 40.9
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 7.4e-27 124.8 200 42.5
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 7.4e-27 124.8 209 40.7
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 9.7e-27 124.4 206 42.7
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 1.3e-26 124.0 199 42.7
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 1.7e-26 123.6 204 41.2
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 2.2e-26 123.2 198 40.4
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.2e-26 123.2 194 42.3
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 2.8e-26 122.9 187 46.0
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 3.7e-26 122.5 190 43.7
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 4.8e-26 122.1 198 41.4
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 6.3e-26 121.7 157 48.4
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 6.3e-26 121.7 183 42.1
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 6.3e-26 121.7 181 43.6
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 8.2e-26 121.3 181 43.6
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 1.1e-25 120.9 203 37.4
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 1.4e-25 120.6 195 42.1
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 1.8e-25 120.2 195 41.5
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.8e-25 120.2 187 40.1
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 2.4e-25 119.8 122 52.5
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 2.4e-25 119.8 199 40.2
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.1e-25 119.4 185 40.5
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 4.1e-25 119.0 190 41.1
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 4.1e-25 119.0 193 39.9
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 4.1e-25 119.0 195 41.5
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 5.3e-25 118.6 183 43.2
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 5.3e-25 118.6 189 40.7
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 5.3e-25 118.6 128 50.8
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 1.2e-24 117.5 182 42.9
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 1.5e-24 117.1 200 39.0
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.5e-24 117.1 190 43.7
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 2.0e-24 116.7 212 40.6
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 2.0e-24 116.7 208 36.5
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 2.6e-24 116.3 213 39.4
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 3.4e-24 115.9 228 38.6
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 7.7e-24 114.8 183 41.5
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.2e-23 113.2 177 41.8
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.8e-23 112.5 194 39.7
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 3.8e-23 112.5 204 42.6
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 3.8e-23 112.5 199 38.7
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 6.5e-23 111.7 195 40.0
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 6.5e-23 111.7 186 38.7
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 6.5e-23 111.7 195 39.0
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 6.5e-23 111.7 204 38.7
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 1.1e-22 110.9 182 40.7
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 1.1e-22 110.9 197 37.6
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 1.4e-22 110.5 188 39.9
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 3.2e-22 109.4 188 39.4
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 3.2e-22 109.4 181 40.9
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 5.5e-22 108.6 180 41.1
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 5.5e-22 108.6 194 38.7
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 7.2e-22 108.2 195 37.9
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 9.4e-22 107.8 198 35.9
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 9.4e-22 107.8 198 38.4
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 2.1e-21 106.7 208 35.6
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 6.1e-21 105.1 212 37.3
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 7.9e-21 104.8 202 38.1
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 1.0e-20 104.4 181 39.2
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 2.3e-20 103.2 187 37.4
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 3.9e-20 102.4 167 41.3
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 5.1e-20 102.1 213 41.8
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 5.1e-20 102.1 213 41.8
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 5.1e-20 102.1 194 37.1
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 2.6e-19 99.8 214 41.6
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 9.7e-19 97.8 152 42.1
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 6.3e-18 95.1 277 32.1
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 4.1e-17 92.4 198 35.9
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 9.1e-17 91.3 150 41.3
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 1.5e-16 90.5 148 40.5
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 2.6e-16 89.7 190 35.3
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 3.5e-16 89.4 123 47.2
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.5e-16 89.4 139 42.4
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 4.5e-16 89.0 194 34.5
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 1.0e-15 87.8 194 34.0
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 1.3e-15 87.4 175 31.4
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 1.7e-15 87.0 194 34.0
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 2.2e-15 86.7 190 34.7
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 3.8e-15 85.9 124 42.7
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 5.0e-15 85.5 193 35.8
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 6.5e-15 85.1 191 34.6
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 1.1e-14 84.3 192 40.6
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 5.5e-14 82.0 194 34.5
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 9.4e-14 81.3 175 28.6
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 9.4e-14 81.3 205 34.6
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 8.0e-13 78.2 151 42.4
Zm00001eb067170 Zea mays HOM05D003703 ORTHO05D004278 3.9e-12 75.9 215 33.5
Gohir.A04G052101 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.2e-10 70.1 88 47.7
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 4.1e-09 65.9 97 48.5
Aa31sc24G60 Aethionema arabicum HOM05D003703 ORTHO05D004278 1.2e-08 64.3 71 52.1
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 3.5e-08 62.8 41 73.2
SEGI_01918 Sequoiadendron giganteum HOM05D003703 ORTHO05D004278 7.2e-06 55.1 37 70.3


User provided reference genes

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