Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.1e-75 286.6 143 100.0
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 2.9e-49 198.7 143 68.5
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 6.5e-49 197.6 143 69.2
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.0e-47 190.7 142 69.7
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.4e-46 189.9 144 63.2
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.8e-46 189.5 143 66.4
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 2.3e-46 189.1 142 67.6
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 6.8e-46 187.6 143 65.7
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.0e-45 186.0 142 66.2
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 5.7e-45 184.5 140 63.6
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.7e-44 183.0 142 64.1
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.2e-44 182.6 142 66.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.7e-44 181.8 142 66.2
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 4.8e-44 181.4 142 62.7
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 6.3e-44 181.0 142 60.6
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.4e-43 179.1 140 64.3
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.1e-43 178.7 142 62.0
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 5.4e-43 177.9 143 62.9
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 7.0e-43 177.6 143 61.5
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.2e-42 176.8 142 61.3
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.2e-42 176.8 142 58.5
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.6e-42 176.4 144 61.8
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 2.7e-42 175.6 138 63.8
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.5e-42 175.3 138 63.0
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 5.9e-42 174.5 143 60.8
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.0e-41 173.7 146 62.3
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.0e-41 173.7 146 62.3
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.0e-41 173.7 142 60.6
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 2.3e-41 172.6 142 60.6
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.3e-41 172.6 141 60.3
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 5.0e-41 171.4 142 59.9
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 6.5e-41 171.0 142 57.0
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 6.5e-41 171.0 138 61.6
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 6.5e-41 171.0 146 61.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 8.6e-41 170.6 141 61.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 1.1e-40 170.2 142 62.0
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.1e-40 170.2 143 58.7
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 1.5e-40 169.9 142 58.5
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.5e-40 169.9 142 62.0
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.5e-40 169.9 142 58.5
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 1.5e-40 169.9 142 56.3
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.9e-40 169.5 142 57.0
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 2.5e-40 169.1 142 56.3
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 3.3e-40 168.7 145 59.3
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 3.3e-40 168.7 140 63.6
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 4.2e-40 168.3 143 60.8
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 5.5e-40 167.9 142 59.2
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.2e-39 166.8 144 61.8
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.6e-39 166.4 142 57.0
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.6e-39 166.4 142 57.0
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.6e-39 166.4 142 57.0
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.6e-39 166.4 142 59.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 2.8e-39 165.6 142 57.0
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 4.7e-39 164.9 142 56.3
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 4.7e-39 164.9 142 56.3
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 4.7e-39 164.9 143 60.1
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 6.1e-39 164.5 142 60.6
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 8.0e-39 164.1 142 59.9
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 8.0e-39 164.1 142 55.6
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.4e-38 163.3 146 60.3
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.4e-38 163.3 138 55.8
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.0e-38 162.2 150 56.7
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 4.0e-38 161.8 142 57.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 8.9e-38 160.6 137 56.2
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 8.9e-38 160.6 177 52.5
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 8.9e-38 160.6 142 56.3
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 1.2e-37 160.2 143 57.3
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.0e-37 159.5 142 57.0
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 3.4e-37 158.7 142 59.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 5.7e-37 157.9 142 54.2
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 7.5e-37 157.5 141 56.0
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 2.2e-36 156.0 153 56.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.8e-36 155.6 162 50.6
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.8e-36 155.6 142 57.7
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 4.1e-35 151.8 148 54.1
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 5.0e-33 144.8 141 56.7
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 5.6e-32 141.4 114 59.6
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 4.0e-30 135.2 102 65.7
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 8.9e-30 134.0 143 50.3
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.6e-29 132.5 143 49.7
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.2e-26 123.6 148 50.0
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 6.0e-26 121.3 149 46.3
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.3e-25 120.2 123 51.2
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.3e-25 120.2 108 56.5
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 2.5e-24 115.9 88 58.0
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 3.3e-24 115.5 107 55.1
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.4e-22 110.2 98 54.1
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.8e-22 109.8 143 48.3
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.8e-22 109.8 128 49.2
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 9.8e-21 104.0 142 40.8
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 9.8e-21 104.0 142 40.8
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.3e-20 103.6 101 53.5
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.2e-20 102.8 139 39.6
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 3.7e-20 102.1 129 43.4
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 3.7e-20 102.1 97 53.6
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 9.2e-19 97.4 107 52.3
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.6e-18 96.7 147 39.5
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 8.6e-17 90.9 87 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 7.3e-16 87.8 114 41.2
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.8e-14 83.2 88 50.0
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 3.7e-12 75.5 75 56.0
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 6.4e-12 74.7 91 46.2
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 3.5e-10 68.9 81 50.6
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 2.8e-07 59.3 111 37.8
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.4e-06 56.2 134 33.6
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 4.0e-06 55.5 73 38.4


User provided reference genes

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