Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 2.6e-111 405.6 236 100.0
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 8.4e-86 320.9 191 100.0
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 9.8e-42 174.5 192 64.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 9.8e-42 174.5 187 65.8
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 6.6e-38 161.8 187 63.1
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 3.3e-37 159.5 199 61.8
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.7e-30 137.1 164 62.8
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.8e-28 129.8 184 55.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 3.7e-25 119.4 188 52.7
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.0e-24 115.2 151 60.9
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.2e-23 114.4 171 55.6
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.6e-20 102.8 184 50.0
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 7.1e-16 88.6 192 47.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 7.1e-16 88.6 175 48.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 9.2e-16 88.2 193 50.3
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 9.2e-16 88.2 93 53.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 1.2e-15 87.8 209 47.8
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.2e-15 87.8 175 49.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.5e-15 86.3 198 48.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.5e-15 86.3 117 48.7
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.6e-15 85.9 151 55.6
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.0e-14 84.7 162 54.9
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.0e-14 83.2 196 49.0
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.0e-14 83.2 86 54.7
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.0e-14 83.2 86 54.7
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 5.1e-14 82.4 198 47.5
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 6.6e-14 82.0 155 53.5
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.1e-13 81.3 191 48.7
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 5.6e-13 79.0 206 46.1
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.3e-13 78.6 107 48.6
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.6e-12 77.4 208 46.6
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.1e-12 77.0 151 54.3
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.1e-12 77.0 200 44.5
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.8e-12 76.6 208 46.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 3.6e-12 76.3 208 46.6
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 3.6e-12 76.3 196 45.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 6.2e-12 75.5 169 50.3
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.3e-11 73.6 163 52.1
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.3e-11 73.6 158 51.3
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 6.8e-11 72.0 198 43.4
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.2e-10 71.2 184 44.6
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.5e-10 70.9 165 46.7
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 2.0e-10 70.5 113 63.7
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 3.4e-10 69.7 215 43.7
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 3.4e-10 69.7 177 46.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 4.4e-10 69.3 178 44.9
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 9.9e-10 68.2 172 49.4
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 9.9e-10 68.2 170 45.3
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.3e-09 67.8 213 43.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.3e-09 67.8 200 46.0
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.7e-09 67.4 116 60.3
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.7e-09 67.4 96 46.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.2e-09 67.0 110 41.8
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.9e-09 66.6 111 45.0
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.7e-09 66.2 192 43.8
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 3.7e-09 66.2 121 40.5
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 5.4e-08 62.4 162 48.1
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 1.2e-07 61.2 90 48.9
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.5e-07 59.7 90 48.9
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.3e-06 57.8 209 42.6
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.3e-06 57.8 145 49.0
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.3e-06 57.8 195 41.0
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.7e-06 57.4 100 45.0
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.7e-06 57.4 98 38.8
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.7e-06 57.4 110 42.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.0e-06 56.6 123 39.8
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 6.6e-06 55.5 192 43.2
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 8.6e-06 55.1 121 38.0


User provided reference genes

Program Settings