Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.8e-165 585.9 302 100.0
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 3.0e-27 126.7 194 45.4
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 3.0e-27 126.7 194 45.4
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 5.1e-27 125.9 242 43.0
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 2.5e-26 123.6 209 44.0
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 3.7e-25 119.8 378 34.4
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 6.2e-25 119.0 248 39.5
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 8.1e-25 118.6 372 34.9
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.4e-24 117.9 358 34.4
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 6.9e-24 115.5 257 39.7
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 9.0e-24 115.2 233 44.2
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 1.5e-23 114.4 247 39.7
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 2.6e-23 113.6 391 33.0
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 2.6e-23 113.6 385 33.8
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.6e-23 113.6 350 35.4
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 3.4e-23 113.2 247 40.5
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 4.5e-23 112.8 198 46.5
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.0e-22 111.7 255 40.0
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 1.7e-22 110.9 401 32.4
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.7e-22 110.9 367 36.0
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 2.2e-22 110.5 258 36.8
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 2.2e-22 110.5 244 40.6
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.2e-22 110.5 414 31.9
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 3.8e-22 109.8 393 33.1
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.9e-22 109.4 255 39.2
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 6.5e-22 109.0 346 35.0
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 6.5e-22 109.0 393 34.6
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 6.5e-22 109.0 243 39.9
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.1e-21 108.2 233 42.9
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 1.1e-21 108.2 393 33.6
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 1.4e-21 107.8 241 41.1
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.9e-21 107.5 202 44.1
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 5.5e-21 105.9 183 45.9
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 5.5e-21 105.9 373 34.6
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 7.1e-21 105.5 246 41.9
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 7.1e-21 105.5 231 38.1
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 9.3e-21 105.1 257 38.5
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 9.3e-21 105.1 371 33.2
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 2.1e-20 104.0 380 33.7
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 3.5e-20 103.2 391 33.2
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 4.6e-20 102.8 231 41.6
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 6.0e-20 102.4 257 38.1
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 7.9e-20 102.1 278 37.4
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.0e-19 101.7 309 33.7
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.3e-19 101.3 239 37.7
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.8e-19 100.9 132 46.2
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 3.0e-19 100.1 366 33.3
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 3.0e-19 100.1 386 32.1
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 3.9e-19 99.8 257 38.1
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 3.9e-19 99.8 252 41.7
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 5.1e-19 99.4 263 38.0
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 5.1e-19 99.4 202 38.6
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 6.7e-19 99.0 208 38.9
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 8.7e-19 98.6 195 43.1
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 1.1e-18 98.2 231 41.6
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 1.5e-18 97.8 258 37.6
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 1.9e-18 97.4 182 41.2
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.9e-18 97.4 185 44.9
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 2.5e-18 97.1 307 35.5
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 2.5e-18 97.1 259 36.3
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 2.5e-18 97.1 347 32.9
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.3e-18 96.7 192 41.1
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 5.7e-18 95.9 265 36.2
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 7.4e-18 95.5 362 34.8
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 9.6e-18 95.1 255 35.3
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 9.6e-18 95.1 173 44.5
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.3e-17 94.7 234 38.0
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 1.3e-17 94.7 215 39.5
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 1.3e-17 94.7 283 33.9
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 2.8e-17 93.6 266 35.3
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 2.8e-17 93.6 252 36.9
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 3.7e-17 93.2 228 37.3
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 6.3e-17 92.4 223 36.8
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.1e-16 91.7 316 33.2
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 1.1e-16 91.7 137 45.3
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 2.4e-16 90.5 171 39.2
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 4.1e-16 89.7 74 56.8
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 1.5e-15 87.8 181 39.2
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 4.5e-15 86.3 262 34.0
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 4.5e-15 86.3 231 33.8
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 5.9e-15 85.9 352 35.2
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 5.9e-15 85.9 229 37.1
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 5.9e-15 85.9 229 37.1
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 5.9e-15 85.9 313 32.9
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 7.6e-15 85.5 239 35.6
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.0e-14 85.1 147 43.5
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.0e-14 85.1 155 43.2
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.3e-14 84.7 238 34.0
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 1.3e-14 84.7 183 44.8
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.7e-14 84.3 264 35.6
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.2e-14 84.0 157 38.9
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.8e-14 83.2 248 34.3
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 3.8e-14 83.2 254 33.9
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 5.0e-14 82.8 141 44.7
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 6.5e-14 82.4 180 37.8
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 6.5e-14 82.4 197 38.1
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 8.4e-14 82.0 262 33.6
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 8.4e-14 82.0 204 34.8
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.1e-13 81.6 104 51.0
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.1e-13 81.6 135 43.0
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.1e-13 81.6 186 38.7
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 1.4e-13 81.3 164 40.9
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.4e-13 81.3 204 39.7
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 1.4e-13 81.3 308 32.5
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.4e-13 81.3 164 37.8
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.9e-13 80.9 244 33.6
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 4.2e-13 79.7 167 37.7
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 7.2e-13 79.0 81 54.3
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 9.3e-13 78.6 141 45.4
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 2.1e-12 77.4 92 50.0
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.7e-12 77.0 157 37.6
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 4.6e-12 76.3 137 43.1
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 6.1e-12 75.9 187 35.8
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 6.1e-12 75.9 165 35.2
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.3e-11 74.7 297 28.3
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 2.3e-11 73.9 294 31.0
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 3.9e-11 73.2 165 37.0
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 5.1e-11 72.8 37 78.4
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.5e-10 71.2 218 36.2
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 3.3e-10 70.1 94 41.5
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 4.3e-10 69.7 223 35.4
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 5.7e-10 69.3 111 41.4
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 1.6e-09 67.8 37 75.7
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 2.8e-09 67.0 173 33.5
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 4.8e-09 66.2 186 36.6
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 8.2e-09 65.5 188 35.6
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 1.4e-08 64.7 155 35.5
SHI19198 Sapria himalayana HOM05D002034 ORTHO05D006399 3.8e-06 56.6 54 46.3


User provided reference genes

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