Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.3e-55 219.5 116 100.0
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.1e-53 212.2 115 98.3
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 4.8e-50 201.1 116 87.9
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 4.5e-48 194.5 116 84.5
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.2e-46 188.0 116 83.6
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 3.6e-45 184.9 114 79.8
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.3e-44 182.2 116 80.2
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 2.2e-42 175.6 112 81.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 4.8e-42 174.5 110 82.7
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 4.1e-41 171.4 117 76.1
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 4.1e-41 171.4 112 79.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 5.3e-41 171.0 117 76.9
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.2e-40 169.9 112 81.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.5e-40 169.5 111 78.4
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 2.0e-40 169.1 112 76.8
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.6e-40 168.7 111 79.3
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 5.9e-40 167.5 117 74.4
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 7.7e-40 167.2 111 78.4
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 7.7e-40 167.2 111 78.4
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.3e-39 166.4 111 80.2
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.2e-39 165.6 112 76.8
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 5.0e-39 164.5 114 72.8
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 6.5e-39 164.1 115 73.9
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 8.5e-39 163.7 112 73.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 8.5e-39 163.7 118 72.0
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 8.5e-39 163.7 112 75.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.4e-38 162.9 111 78.4
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.9e-38 162.5 118 73.7
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-38 162.2 117 73.5
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.2e-38 161.8 117 73.5
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.2e-38 161.8 117 71.8
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 7.2e-38 160.6 114 72.8
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 7.2e-38 160.6 113 72.6
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 9.4e-38 160.2 111 74.8
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 9.4e-38 160.2 112 73.2
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.1e-37 159.1 113 71.7
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 3.6e-37 158.3 113 74.3
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 3.6e-37 158.3 112 72.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 4.7e-37 157.9 110 73.6
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 4.7e-37 157.9 113 71.7
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 7.9e-37 157.1 111 75.7
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 72.6
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 72.6
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 72.6
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 72.6
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 72.6
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.0e-36 156.8 111 72.1
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.0e-36 156.8 112 75.0
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 73.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.4e-36 156.4 110 71.8
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.8e-36 156.0 113 71.7
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 3.0e-36 155.2 112 72.3
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 3.9e-36 154.8 113 70.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 5.1e-36 154.5 113 70.8
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 6.7e-36 154.1 113 71.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.1e-35 153.3 114 66.7
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.5e-35 152.9 111 69.4
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.5e-35 152.9 99 80.8
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 113 69.9
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 72.7
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.6e-35 152.1 106 73.6
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 5.7e-35 151.0 110 70.9
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 7.4e-35 150.6 117 66.7
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 7.4e-35 150.6 110 71.8
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.3e-34 149.8 115 71.3
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.7e-34 149.4 113 69.0
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.2e-34 149.1 112 67.0
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.2e-34 149.1 107 72.9
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 2.2e-34 149.1 110 70.9
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 2.8e-34 148.7 107 72.0
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.7e-34 148.3 111 70.3
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.4e-33 146.4 110 69.1
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.8e-33 146.0 111 69.4
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.4e-33 145.6 117 65.0
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.1e-33 145.2 111 68.5
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 4.1e-33 144.8 113 67.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 5.3e-33 144.4 106 70.8
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 2.6e-32 142.1 111 66.7
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.6e-32 142.1 117 64.1
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 4.5e-32 141.4 111 66.7
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 5.9e-32 141.0 102 71.6
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 7.7e-32 140.6 111 66.7
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 1.7e-31 139.4 112 64.3
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 6.5e-31 137.5 134 57.5
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 4.2e-30 134.8 97 72.2
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 7.2e-30 134.0 105 66.7
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.0e-28 130.2 172 46.5
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.3e-28 129.0 89 76.4
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.5e-27 126.3 105 66.7
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.3e-27 125.2 83 81.9
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 7.4e-27 124.0 89 74.2
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.3e-26 123.2 100 69.0
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.7e-26 122.9 83 75.9
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 2.2e-26 122.5 82 75.6
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 2.8e-26 122.1 83 75.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 6.3e-26 120.9 89 70.8
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 8.2e-26 120.6 89 69.7
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 8.2e-26 120.6 85 74.1
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.1e-25 120.2 112 58.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.4e-25 119.8 89 70.8
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.4e-25 119.0 85 70.6
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 5.3e-25 117.9 91 73.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 7.0e-25 117.5 115 59.1
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.6e-24 116.3 87 67.8
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.6e-24 115.5 80 72.5
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.9e-23 112.1 88 67.0
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.0e-20 103.6 79 64.6
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.5e-19 99.8 84 59.5
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 5.7e-19 97.8 64 75.0
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.4e-17 92.4 115 47.8
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.6e-16 89.7 67 65.7
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 3.8e-15 85.1 105 45.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-14 82.4 53 75.5
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.2e-14 82.0 77 54.5
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 3.6e-13 78.6 49 75.5
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 2.6e-11 72.4 110 40.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.3e-10 67.8 53 69.8
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.1e-09 65.1 108 43.5


User provided reference genes

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