Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.8e-112 409.5 231 100.0
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 3.0e-51 206.1 152 82.9
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 8.9e-48 194.5 152 77.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.5e-47 193.7 155 77.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 2.6e-47 193.0 154 76.6
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.2e-46 189.9 147 76.9
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.9e-46 189.5 152 75.7
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 2.9e-46 189.5 153 79.7
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 6.4e-46 188.3 152 75.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 8.4e-46 188.0 141 78.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 3.2e-45 186.0 153 76.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 4.2e-45 185.7 152 76.3
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 4.2e-45 185.7 155 76.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 5.4e-45 185.3 162 72.2
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 7.1e-45 184.9 152 73.7
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 7.1e-45 184.9 152 74.3
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 9.2e-45 184.5 153 75.2
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.2e-44 184.1 153 73.9
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.6e-44 183.7 160 72.5
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.6e-44 183.7 155 75.5
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.1e-44 183.3 156 76.3
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 3.5e-44 182.6 155 74.8
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 3.5e-44 182.6 162 71.0
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 6.0e-44 181.8 141 78.7
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 6.0e-44 181.8 153 73.9
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.0e-44 181.8 154 74.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.0e-43 181.0 152 75.0
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.7e-43 180.3 145 73.8
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.3e-43 179.9 154 74.0
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 3.0e-43 179.5 152 73.7
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 6.6e-43 178.3 164 69.5
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 6.6e-43 178.3 152 73.0
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.7e-43 177.9 158 72.2
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.1e-42 177.6 152 73.0
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.9e-42 176.8 147 75.5
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.9e-42 176.8 155 72.9
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.9e-42 176.8 152 74.3
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 2.5e-42 176.4 152 73.7
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 4.3e-42 175.6 148 73.0
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 4.3e-42 175.6 155 72.3
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 4.3e-42 175.6 152 70.4
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.3e-42 174.9 152 71.7
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.3e-42 174.9 152 72.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.7e-41 172.2 155 72.3
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 8.1e-41 171.4 152 71.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.4e-40 169.9 149 71.8
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.3e-40 168.7 163 68.1
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 5.3e-40 168.7 116 74.1
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 9.0e-40 167.9 154 71.4
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.5e-39 167.2 151 72.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 2.6e-39 166.4 152 69.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 5.8e-39 165.2 141 70.9
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 9.9e-39 164.5 152 69.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 2.2e-38 163.3 142 73.2
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 4.9e-38 162.2 154 70.8
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 6.4e-38 161.8 143 70.6
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 6.4e-38 161.8 150 68.7
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 8.4e-38 161.4 148 71.6
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.4e-37 160.6 141 71.6
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.9e-37 160.2 143 69.9
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 3.2e-37 159.5 148 70.3
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 4.2e-37 159.1 145 70.3
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 5.4e-37 158.7 156 66.0
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 5.4e-37 158.7 142 71.1
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 7.1e-37 158.3 157 67.5
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 7.1e-37 158.3 133 74.4
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 9.3e-37 157.9 156 66.7
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 9.3e-37 157.9 145 69.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.2e-36 157.5 143 69.2
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.2e-36 157.5 191 58.1
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.6e-36 157.1 188 49.5
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 2.7e-36 156.4 153 66.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.7e-36 156.4 190 57.9
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.5e-36 156.0 142 70.4
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.0e-35 154.5 142 69.7
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.0e-35 154.5 146 67.1
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.3e-35 153.3 143 70.6
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.1e-35 152.1 149 65.8
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 5.1e-35 152.1 142 67.6
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 8.7e-35 151.4 142 67.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.9e-34 150.2 142 69.0
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.5e-34 149.8 118 76.3
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 5.6e-34 148.7 142 66.9
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 2.8e-33 146.4 146 65.8
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.8e-32 143.7 141 65.2
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 3.1e-32 142.9 154 59.1
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.0e-32 142.5 146 65.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.5e-31 140.6 153 65.4
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 3.4e-31 139.4 155 54.2
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.4e-29 133.3 130 61.5
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.2e-29 132.9 192 45.3
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 5.4e-29 132.1 154 57.1
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.2e-28 131.0 107 71.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 6.0e-28 128.6 110 61.8
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.0e-27 127.9 111 72.1
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 3.9e-27 125.9 165 49.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.6e-26 122.1 128 55.5
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 7.4e-26 121.7 105 64.8
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.6e-25 120.6 107 67.3
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.5e-23 114.0 113 55.8
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.1e-20 103.6 157 49.7
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.5e-18 97.4 89 55.1
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.0e-15 87.0 159 40.9
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 3.8e-14 82.8 97 49.5
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.9e-13 80.5 94 46.8
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.2e-12 77.8 58 65.5
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 4.1e-08 62.8 95 37.9
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 1.2e-07 61.2 67 53.7
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 2.0e-07 60.5 52 55.8


User provided reference genes

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