Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 8.7e-154 547.0 284 100.0
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 2.2e-128 462.6 288 80.6
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 8.2e-128 460.7 288 80.6
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 9.7e-121 437.2 288 77.1
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 8.2e-120 434.1 288 76.4
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 3.1e-119 432.2 288 78.1
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 4.1e-119 431.8 288 77.4
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.6e-118 429.1 288 76.4
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 2.6e-118 429.1 287 75.6
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 1.3e-117 426.8 288 75.7
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.7e-117 426.4 288 75.7
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.2e-117 426.0 288 75.7
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 3.8e-117 425.2 288 75.3
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 3.8e-117 425.2 288 75.0
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 8.5e-117 424.1 288 76.7
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 1.1e-116 423.7 288 74.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 2.5e-116 422.5 288 75.3
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 2.5e-116 422.5 288 75.3
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 2.5e-116 422.5 288 76.4
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 7.2e-116 421.0 288 74.3
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 2.1e-115 419.5 288 75.0
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 3.6e-115 418.7 288 74.7
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 3.6e-115 418.7 288 74.7
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 4.7e-115 418.3 288 75.7
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 6.1e-115 417.9 288 74.7
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 1.0e-114 417.2 288 71.9
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.8e-114 416.4 288 74.3
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 3.0e-114 415.6 288 74.3
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 6.8e-114 414.5 288 71.5
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 1.2e-113 413.7 288 72.6
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 7.5e-113 411.0 288 72.9
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 9.8e-113 410.6 288 71.5
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.7e-112 409.8 288 71.5
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 4.8e-112 408.3 288 73.3
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 1.1e-111 407.1 289 70.9
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 2.4e-111 406.0 288 70.8
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 4.1e-111 405.2 287 71.8
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 4.1e-111 405.2 288 72.6
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 5.4e-111 404.8 288 72.6
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 1.2e-110 403.7 426 54.7
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 4.5e-110 401.7 288 71.9
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 7.7e-110 401.0 288 69.8
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.0e-109 400.6 288 71.9
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 8.5e-109 397.5 288 71.2
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.9e-108 396.4 288 70.8
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 1.9e-108 396.4 288 70.5
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 7.2e-108 394.4 282 71.6
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 2.1e-107 392.9 283 71.4
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 2.7e-107 392.5 288 70.1
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 3.6e-107 392.1 280 71.4
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 4.0e-106 388.7 280 70.4
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 5.2e-106 388.3 249 78.7
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 5.2e-106 388.3 282 69.9
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 2.0e-105 386.3 283 70.0
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 9.8e-105 384.0 280 68.9
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 1.3e-104 383.6 288 68.1
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 2.2e-104 382.9 288 69.4
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 2.8e-104 382.5 322 63.0
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 4.9e-104 381.7 289 68.5
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 1.1e-103 380.6 280 68.2
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.1e-103 380.6 280 69.3
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 2.4e-103 379.4 280 69.3
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 2.4e-103 379.4 280 69.3
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 2.4e-103 379.4 280 69.3
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 3.1e-103 379.0 280 68.2
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 5.4e-103 378.3 289 68.2
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.2e-102 377.1 280 68.2
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 2.7e-102 375.9 280 68.2
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.7e-102 375.9 288 67.0
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 5.9e-102 374.8 282 68.8
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 7.7e-102 374.4 283 65.7
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 1.0e-101 374.0 283 67.5
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 1.3e-101 373.6 288 66.0
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.8e-101 372.1 249 75.1
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 6.6e-101 371.3 264 71.2
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.9e-100 369.8 253 71.5
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 3.3e-100 369.0 282 68.4
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 5.6e-100 368.2 282 67.4
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 1.6e-99 366.7 281 67.6
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 2.1e-99 366.3 284 66.9
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 3.6e-99 365.5 287 66.9
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 1.8e-98 363.2 301 65.8
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.2e-97 360.5 288 64.9
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.2e-97 360.5 285 67.0
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 7.5e-97 357.8 279 67.0
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 1.2e-94 350.5 348 56.0
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 2.0e-94 349.7 236 76.7
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 2.0e-94 349.7 279 64.2
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 1.3e-93 347.1 288 66.0
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 1.5e-92 343.6 279 62.7
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 2.3e-90 336.3 279 63.8
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 6.8e-90 334.7 288 60.1
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.2e-89 334.0 288 59.7
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 5.4e-87 325.1 273 61.2
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 1.5e-84 317.0 221 71.5
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 1.5e-84 317.0 284 62.0
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 2.8e-83 312.8 322 52.8
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 4.7e-83 312.0 236 67.4
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 3.1e-82 309.3 195 79.5
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.4e-79 300.4 241 65.6
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.9e-76 290.0 284 52.5
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 6.8e-74 281.6 282 52.1
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 4.9e-72 275.4 200 69.5
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 6.4e-72 275.0 288 51.7
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 3.0e-53 213.0 143 76.2
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 7.4e-52 208.4 164 61.0
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.3e-48 197.6 323 40.9
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 8.4e-48 194.9 281 42.7
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.1e-45 185.7 181 52.5
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.9e-36 157.1 181 50.8
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.8e-34 150.6 131 57.3
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.6e-33 146.7 329 33.7
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 3.4e-33 146.4 116 69.8
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 1.4e-31 141.0 117 67.5
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.6e-30 137.5 160 51.9
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.6e-27 127.5 189 40.7
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.1e-26 123.2 96 63.5
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 7.2e-23 112.1 95 65.3
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.8e-19 99.4 153 39.2
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 2.0e-09 67.4 86 44.2
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 2.5e-07 60.5 41 68.3
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 5.5e-07 59.3 68 45.6
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.7e-06 56.2 58 46.6


User provided reference genes

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