Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 0.0e+00 1090.1 552 100.0
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 2.3e-81 307.4 540 44.1
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.9e-72 277.7 644 38.5
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.9e-67 261.2 582 39.3
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.6e-45 187.6 605 34.2
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 6.2e-39 166.4 584 30.3
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 4.2e-35 153.7 679 28.1
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 4.0e-30 137.1 576 28.1
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 3.8e-28 130.6 582 26.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 7.9e-26 122.9 667 27.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 5.1e-25 120.2 598 28.4
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.1e-24 119.0 600 28.0
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.5e-24 118.6 662 26.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.3e-23 115.5 595 29.1
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 6.9e-22 109.8 530 27.7
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.2e-21 109.0 669 25.7
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 6.5e-20 103.2 559 26.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 8.5e-20 102.8 528 26.7
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.0e-17 95.9 375 28.8
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.9e-17 94.0 698 23.8
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 8.7e-17 92.8 652 26.5
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.7e-16 90.1 554 26.0
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 5.7e-16 90.1 597 24.8
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.7e-15 87.4 395 29.4
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 4.8e-15 87.0 388 29.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.4e-14 85.5 377 28.9
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.3e-14 83.6 447 27.1
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.0e-13 81.6 399 28.1
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 3.4e-13 80.9 402 28.6
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.3e-12 79.0 412 26.7
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.9e-12 77.8 517 26.5
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 3.8e-12 77.4 340 30.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 6.5e-12 76.6 692 23.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 3.2e-11 74.3 629 24.8
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 5.5e-11 73.6 353 27.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 7.2e-11 73.2 350 28.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 7.2e-11 73.2 612 23.4
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 9.4e-11 72.8 627 26.0
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.6e-10 72.0 637 24.5
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.6e-10 72.0 338 29.6
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 2.7e-10 71.2 386 27.5
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 4.7e-10 70.5 348 27.6
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 4.7e-10 70.5 432 25.0
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.1e-10 70.1 176 35.8
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.0e-09 69.3 531 25.0
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.0e-09 69.3 379 29.8
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 2.3e-09 68.2 408 27.2
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.0e-09 67.8 227 32.2
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 3.0e-09 67.8 577 24.6
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 5.1e-09 67.0 190 33.7
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 6.7e-09 66.6 530 24.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 8.8e-09 66.2 134 38.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.1e-08 65.9 639 23.9
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.0e-08 65.1 124 40.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.0e-08 65.1 348 27.0
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 3.3e-08 64.3 198 34.3
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 5.7e-08 63.5 136 37.5
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 5.7e-08 63.5 564 22.9
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 9.7e-08 62.8 192 31.8
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 9.7e-08 62.8 392 27.8
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.3e-07 62.4 513 27.3
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 1.7e-07 62.0 459 25.1
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 1.7e-07 62.0 338 28.7
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.7e-07 60.8 206 30.1
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 6.3e-07 60.1 324 26.9
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.3e-07 60.1 355 26.8
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.4e-06 58.9 378 28.8
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.8e-06 58.5 362 28.2
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 2.4e-06 58.2 236 28.8
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.4e-06 58.2 448 24.8
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 3.1e-06 57.8 481 23.5
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 5.3e-06 57.0 125 39.2
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.3e-06 57.0 295 29.2
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 9.1e-06 56.2 364 28.3


User provided reference genes

Program Settings