Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 2.7e-112 408.7 207 100.0
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.4e-28 130.6 252 44.8
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 3.0e-26 122.9 286 40.2
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 1.6e-24 117.1 247 44.1
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.6e-24 117.1 235 43.0
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 5.4e-20 102.1 257 38.5
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.0e-18 96.3 241 41.5
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 3.0e-18 96.3 253 38.7
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.9e-18 95.9 237 38.8
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 6.6e-18 95.1 233 39.9
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 8.6e-18 94.7 241 37.8
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.5e-17 94.0 241 41.1
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.5e-17 94.0 221 41.2
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.9e-17 93.6 211 41.7
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 1.9e-17 93.6 232 39.2
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 2.5e-17 93.2 231 41.1
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 2.5e-17 93.2 159 46.5
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 7.3e-17 91.7 247 39.7
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.6e-16 90.5 259 37.5
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.8e-16 89.7 217 41.0
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 2.4e-15 86.7 250 38.4
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.4e-15 86.7 269 38.3
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.4e-15 86.7 209 37.8
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.8e-15 85.1 224 38.4
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.5e-14 84.0 274 35.0
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 4.4e-14 82.4 241 36.5
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 7.6e-14 81.6 258 36.0
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 9.9e-14 81.3 161 44.1
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.9e-13 79.7 225 37.8
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 3.8e-13 79.3 204 40.2
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 6.4e-13 78.6 209 38.8
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.4e-13 78.2 221 35.3
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 8.4e-13 78.2 200 37.5
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.1e-12 77.8 255 37.3
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.9e-12 77.0 206 40.3
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.9e-12 77.0 156 45.5
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.4e-12 76.6 243 38.3
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.2e-12 75.9 258 36.0
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 9.2e-12 74.7 249 32.1
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 9.2e-12 74.7 159 42.8
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.6e-11 73.9 174 42.5
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.6e-11 73.9 269 35.3
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 6.0e-11 72.0 55 67.3
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 6.0e-11 72.0 53 69.8
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 7.8e-11 71.6 191 40.3
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 1.3e-10 70.9 215 35.8
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.0e-10 69.7 252 34.5
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 8.7e-10 68.2 192 37.5
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.5e-09 67.4 251 34.7
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.5e-09 66.6 216 35.2
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 3.3e-09 66.2 167 41.3
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 3.3e-09 66.2 123 42.3
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 5.6e-09 65.5 175 38.3
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.2e-08 64.3 270 34.4
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.6e-08 63.9 206 34.0
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.6e-08 63.9 260 34.6
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 2.1e-08 63.5 190 38.4
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.1e-07 61.2 112 40.2
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.1e-07 59.7 136 41.2
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.1e-07 59.7 266 34.2
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 3.1e-07 59.7 208 31.7
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 4.0e-07 59.3 168 36.9
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 5.3e-07 58.9 189 35.4
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 9.0e-07 58.2 230 32.2
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 9.0e-07 58.2 244 34.8
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.2e-06 57.8 211 35.1
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 1.2e-06 57.8 212 33.5
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 2.6e-06 56.6 212 33.0
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 2.6e-06 56.6 50 60.0
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 3.4e-06 56.2 149 40.3
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.4e-06 55.8 233 32.6
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.4e-06 55.8 233 32.6
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 7.6e-06 55.1 164 34.8
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 7.6e-06 55.1 172 34.9
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 9.9e-06 54.7 114 43.0


User provided reference genes

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