Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 0.0e+00 1463.0 825 100.0
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 4.0e-276 954.9 828 66.4
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.5e-275 951.4 843 66.4
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 1.8e-271 939.5 834 65.8
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.2e-267 926.8 854 65.2
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 2.1e-264 916.0 849 64.4
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 6.2e-261 904.4 878 61.7
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 5.7e-254 881.3 835 60.7
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 4.8e-253 878.2 824 63.2
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.1e-252 875.5 836 60.8
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 6.9e-252 874.4 819 60.0
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 1.2e-251 873.6 837 60.6
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.2e-251 873.6 857 58.6
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 6.5e-250 867.8 851 61.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 6.5e-250 867.8 820 60.9
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.9e-249 866.3 835 61.0
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 3.2e-249 865.5 831 61.5
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.2e-249 865.5 840 63.0
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.2e-249 865.1 845 61.9
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 9.4e-249 864.0 854 59.4
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.7e-248 862.4 851 61.1
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 4.6e-248 861.7 835 61.8
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 6.1e-248 861.3 854 58.3
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.1e-246 857.1 856 60.5
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 2.5e-246 855.9 846 60.5
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 9.7e-246 854.0 842 61.2
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.3e-245 853.6 875 59.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 3.7e-245 852.0 865 58.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 8.2e-245 850.9 857 58.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.8e-244 849.7 835 60.6
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 5.9e-243 844.7 875 55.7
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.8e-242 842.0 856 57.1
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.9e-241 839.7 826 60.5
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.2e-240 837.0 852 58.7
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.4e-239 833.6 818 62.1
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.8e-239 833.2 851 58.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 2.3e-239 832.8 847 58.9
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 3.0e-239 832.4 856 58.5
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 3.3e-238 828.9 840 61.7
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.1e-236 823.9 811 62.0
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 3.1e-236 822.4 833 58.7
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 5.3e-236 821.6 824 61.4
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.2e-234 816.2 853 56.6
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 2.5e-233 812.8 828 59.1
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 9.4e-233 810.8 845 56.3
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.1e-232 809.7 840 57.1
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.1e-230 803.9 839 57.8
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 3.3e-230 802.4 861 56.7
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 9.7e-230 800.8 863 57.4
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 2.2e-229 799.7 830 58.0
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 3.7e-229 798.9 835 58.6
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.4e-228 796.2 838 57.5
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 3.1e-228 795.8 846 57.2
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.3e-226 790.4 866 57.6
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.3e-226 790.4 875 53.5
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.2e-226 789.6 822 57.5
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 6.5e-226 788.1 838 59.1
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-225 786.9 838 55.4
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.5e-225 786.9 841 57.1
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.5e-225 786.9 831 58.7
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.5e-225 786.2 838 57.2
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.0e-223 780.8 827 55.1
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.0e-223 780.8 842 56.3
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 1.0e-223 780.8 868 55.9
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.0e-223 780.8 833 57.5
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.4e-223 780.4 813 56.5
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.8e-223 780.0 856 56.9
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 2.3e-223 779.6 834 57.0
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 2.3e-223 779.6 849 56.2
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.5e-222 776.9 847 55.3
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.9e-218 762.7 832 55.0
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 1.9e-217 760.0 851 55.1
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 8.8e-215 751.1 828 55.6
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 2.2e-213 746.5 837 53.8
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 3.7e-213 745.7 831 55.5
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.1e-212 744.2 863 52.8
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 7.0e-212 741.5 832 54.2
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 4.5e-211 738.8 847 53.2
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 9.5e-209 731.1 847 54.0
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.8e-208 729.6 834 54.1
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 3.0e-207 726.1 788 56.2
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.6e-203 713.8 833 54.9
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.7e-203 713.0 915 50.2
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 7.8e-203 711.4 789 56.3
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 8.0e-200 701.4 713 58.9
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.8e-198 695.3 851 50.5
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.3e-197 694.1 850 52.0
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 9.5e-193 677.9 841 50.8
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 6.2e-192 675.2 676 60.4
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.7e-189 667.2 841 51.1
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.4e-188 664.1 842 50.2
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.7e-187 659.8 817 51.2
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 7.8e-187 658.3 842 50.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 6.6e-186 655.2 842 50.4
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 8.1e-184 648.3 841 50.2
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.3e-183 646.7 821 49.9
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.3e-183 646.7 850 50.7
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 4.9e-181 639.0 840 50.5
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 8.4e-181 638.3 840 49.2
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.5e-177 626.7 836 49.2
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.1e-175 619.8 867 46.8
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.9e-172 610.5 943 43.5
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 6.0e-171 605.5 821 46.3
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 8.7e-170 601.7 821 45.8
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.9e-169 600.5 821 45.9
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 8.1e-168 595.1 835 47.3
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 2.6e-166 590.1 841 47.1
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 4.3e-161 572.8 665 57.0
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 4.9e-157 559.3 851 43.7
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 3.2e-156 556.6 847 44.6
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 6.0e-155 552.4 467 63.0
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.3e-153 546.2 776 46.8
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 9.0e-151 538.5 624 55.9
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 7.2e-140 502.3 762 43.2
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.2e-133 480.7 728 45.1
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.6e-131 474.6 760 40.9
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 5.7e-129 466.1 489 58.7
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.3e-127 459.5 856 40.0
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 9.7e-121 438.7 574 51.7
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.0e-114 418.7 552 50.5
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 2.0e-110 404.4 920 34.7
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.5e-110 403.3 513 52.8
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 1.1e-108 398.7 350 62.3
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 8.0e-107 392.5 315 64.8
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 9.8e-105 385.6 552 48.9
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.3e-98 364.4 443 54.4
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.0e-90 339.0 565 41.9
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.8e-90 336.3 274 65.7
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 9.8e-89 332.4 845 34.9
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 1.4e-87 328.6 561 39.0
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.6e-86 323.6 456 42.3
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.5e-84 317.8 678 39.7
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 3.3e-84 317.4 468 44.4
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 3.6e-83 313.9 930 31.1
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 3.1e-74 284.3 806 30.0
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 7.6e-57 226.5 815 30.6
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 5.6e-52 210.3 366 46.7
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.4e-50 204.9 351 43.6
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.0e-46 190.3 390 43.1
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-45 186.8 399 36.8
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 2.7e-38 164.9 135 64.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 3.7e-35 154.5 251 46.2
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.2e-35 153.3 315 40.0
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.4e-33 147.9 337 37.4
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 9.7e-28 129.8 137 52.6
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.5e-24 117.1 203 40.9
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.2e-22 112.8 220 39.1
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.0e-21 109.8 128 53.1
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 8.8e-21 106.7 142 47.2
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 2.4e-18 98.6 106 48.1
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 3.4e-17 94.7 95 51.6
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.0e-16 90.9 84 54.8
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 6.5e-16 90.5 136 46.3
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.9e-15 89.0 133 44.4
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-15 87.8 164 39.6
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.2e-15 87.0 152 40.1
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 9.4e-15 86.7 79 55.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-14 85.5 342 30.7
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-13 82.8 232 31.0
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-12 79.0 292 31.5
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 6.3e-11 73.9 71 59.2
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-10 72.8 298 29.5
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 5.3e-10 70.9 69 56.5
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 9.1e-10 70.1 71 52.1
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.1e-10 70.1 335 27.8
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.7e-09 67.0 87 47.1
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-08 65.9 184 32.1
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-08 65.1 146 37.0
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 5.0e-08 64.3 81 51.9
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 6.5e-08 63.9 51 68.6
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 1.1e-07 63.2 68 50.0
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 5.5e-07 60.8 124 37.9
BcaB07g32274 Brassica carinata HOM05D003551 ORTHO05D004869 2.7e-06 58.5 62 46.8
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.7e-06 57.8 65 49.2


User provided reference genes

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