Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28173 Striga asiatica HOM05D002608 ORTHO05D013420 4.6e-64 248.1 157 100.0
SGA_v2.0_scaffold92G28166 Striga asiatica HOM05D002608 ORTHO05D003838 6.5e-42 174.5 164 78.0
SalBow2G2051 Salvia bowleyana HOM05D002608 ORTHO05D003838 4.5e-19 98.6 171 53.2
Oeu041410.2 Olea europaea HOM05D002608 ORTHO05D013420 2.9e-18 95.9 168 54.8
Peaxi162Scf00039g01224 Petunia axillaris HOM05D002608 ORTHO05D003838 8.0e-16 87.8 171 49.7
MSTRG.18039 Avicennia marina HOM05D002608 ORTHO05D003838 1.4e-15 87.0 163 52.8
SalBow6G5981 Salvia bowleyana HOM05D002608 ORTHO05D003838 1.4e-15 87.0 174 48.3
Manes.09G174300 Manihot esculenta HOM05D002608 ORTHO05D003838 1.5e-14 83.6 171 48.5
Sopen09g005200 Solanum pennellii HOM05D002608 ORTHO05D003838 2.6e-14 82.8 172 49.4
Sc15g0004560 Simmondsia chinensis HOM05D002608 ORTHO05D003838 3.4e-14 82.4 177 44.1
TAR365G0313 Trochodendron aralioides HOM05D002608 ORTHO05D003838 4.4e-14 82.0 166 45.8
Nitab4.5_0000216g0080 Nicotiana tabacum HOM05D002608 ORTHO05D003838 5.7e-14 81.6 175 49.1
Oeu049216.1 Olea europaea HOM05D002608 ORTHO05D003838 5.7e-14 81.6 171 48.0
Thecc.01G130800 Theobroma cacao HOM05D002608 ORTHO05D003838 5.7e-14 81.6 164 48.8
Solyc09g010460.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 7.5e-14 81.3 172 45.9
TWI36G0315 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 1.7e-13 80.1 165 51.5
TAR374G0864 Trochodendron aralioides HOM05D002608 ORTHO05D003838 1.7e-13 80.1 171 44.4
TAR383G0809 Trochodendron aralioides HOM05D002608 ORTHO05D003838 1.7e-13 80.1 167 46.7
Thecc.05G318700 Theobroma cacao HOM05D002608 ORTHO05D003838 6.3e-13 78.2 175 46.9
Nitab4.5_0003267g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 8.3e-13 77.8 175 49.1
Migut.H01296 Erythranthe guttata HOM05D002608 ORTHO05D003838 1.1e-12 77.4 176 45.5
Sc02g0009020 Simmondsia chinensis HOM05D002608 ORTHO05D003838 1.8e-12 76.6 175 47.4
Cfa017421 Carpinus fangiana HOM05D002608 ORTHO05D003838 2.4e-12 76.3 178 46.6
TWI56G0709 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 2.4e-12 76.3 171 46.2
COL.COLO4_35714 Corchorus olitorius HOM05D002608 ORTHO05D003838 3.1e-12 75.9 165 46.7
Sopen10g034110 Solanum pennellii HOM05D002608 ORTHO05D003838 3.1e-12 75.9 169 45.6
Actinidia21508 Actinidia chinensis HOM05D002608 ORTHO05D003838 5.4e-12 75.1 176 45.5
Duzib106G0606 Durio zibethinus HOM05D002608 ORTHO05D003838 5.4e-12 75.1 178 42.1
Gohir.D08G224200 Gossypium hirsutum HOM05D002608 ORTHO05D003838 5.4e-12 75.1 174 40.8
QL05p010646 Quercus lobata HOM05D002608 ORTHO05D003838 5.4e-12 75.1 175 48.0
QL07p047431 Quercus lobata HOM05D002608 ORTHO05D003838 5.4e-12 75.1 175 48.0
Nitab4.5_0000202g0170 Nicotiana tabacum HOM05D002608 ORTHO05D003838 7.0e-12 74.7 175 45.7
Potri.005G021400 Populus trichocarpa HOM05D002608 ORTHO05D003838 9.2e-12 74.3 162 50.6
Manes.08G114400 Manihot esculenta HOM05D002608 ORTHO05D003838 1.2e-11 73.9 172 43.6
Nitab4.5_0002077g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 1.6e-11 73.6 175 46.9
QL03p017837 Quercus lobata HOM05D002608 ORTHO05D003838 1.6e-11 73.6 182 44.5
QL93p2009_0049 Quercus lobata HOM05D002608 ORTHO05D003838 1.6e-11 73.6 182 44.5
Rhsim05G0135800 Rhododendron simsii HOM05D002608 ORTHO05D003838 1.6e-11 73.6 158 51.3
Sp6g06010 Schrenkiella parvula HOM05D002608 ORTHO05D003838 1.6e-11 73.6 180 42.8
Cfa006672 Carpinus fangiana HOM05D002608 ORTHO05D003838 2.0e-11 73.2 196 41.8
CSS0020825 Camellia sinensis var. sinensis HOM05D002608 ORTHO05D003838 2.7e-11 72.8 111 55.9
BolC2t10192H Brassica oleracea HOM05D002608 ORTHO05D003838 3.5e-11 72.4 173 46.2
Dinv05264 Davidia involucrata HOM05D002608 ORTHO05D003838 3.5e-11 72.4 171 46.2
Nn2g12763 Nelumbo nucifera HOM05D002608 ORTHO05D003838 3.5e-11 72.4 169 45.6
Phvul.001G169900 Phaseolus vulgaris HOM05D002608 ORTHO05D003838 3.5e-11 72.4 169 45.0
Gorai.004G238100 Gossypium raimondii HOM05D002608 ORTHO05D003838 4.5e-11 72.0 171 43.9
Sabra05G0027400 Salix brachista HOM05D002608 ORTHO05D003838 4.5e-11 72.0 171 43.3
Solyc10g084670.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 5.9e-11 71.6 169 44.4
Haze_04099 Corylus avellana HOM05D002608 ORTHO05D003838 7.8e-11 71.2 181 45.9
MELO3C002822.2 Cucumis melo HOM05D002608 ORTHO05D003838 7.8e-11 71.2 177 43.5
Psat3g048960 Pisum sativum HOM05D002608 ORTHO05D003838 7.8e-11 71.2 171 42.1
A02p26260 Brassica napus HOM05D002608 ORTHO05D003838 1.0e-10 70.9 173 45.7
BraA02t07627Z Brassica rapa HOM05D002608 ORTHO05D003838 1.0e-10 70.9 173 45.7
Ca_08783_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 1.0e-10 70.9 172 44.8
PGSC0003DMG400008926 Solanum tuberosum HOM05D002608 ORTHO05D003838 1.0e-10 70.9 156 45.5
Gohir.A11G268500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.3e-10 70.5 173 40.5
BcaB01g01651 Brassica carinata HOM05D002608 ORTHO05D003838 1.7e-10 70.1 176 44.3
ClCG03G006160 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.7e-10 70.1 176 43.2
Cc06_g02900 Coffea canephora HOM05D002608 ORTHO05D003838 1.7e-10 70.1 166 49.4
MD12G1209700 Malus domestica HOM05D002608 ORTHO05D003838 1.7e-10 70.1 171 44.4
AUR62005245 Chenopodium quinoa HOM05D002608 ORTHO05D003838 2.3e-10 69.7 149 43.0
Lsat_1_v5_gn_1_55601 Lactuca sativa HOM05D002608 ORTHO05D003838 2.3e-10 69.7 172 45.9
Peaxi162Scf01093g00011 Petunia axillaris HOM05D002608 ORTHO05D003838 2.3e-10 69.7 166 40.4
CAN.G97.14 Capsicum annuum HOM05D002608 ORTHO05D003838 3.8e-10 68.9 177 43.5
AUR62000719 Chenopodium quinoa HOM05D002608 ORTHO05D003838 3.8e-10 68.9 149 42.3
Prupe.6G317100 Prunus persica HOM05D002608 ORTHO05D003838 3.8e-10 68.9 174 43.7
Sabra13G0010400 Salix brachista HOM05D002608 ORTHO05D003838 3.8e-10 68.9 165 44.8
Haze_20749 Corylus avellana HOM05D002608 ORTHO05D003838 5.0e-10 68.6 178 40.4
Hma1.2p1_0472F.1_g159760 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 5.0e-10 68.6 180 44.4
Potri.013G011900 Populus trichocarpa HOM05D002608 ORTHO05D003838 5.0e-10 68.6 166 45.2
BcaC03g16352 Brassica carinata HOM05D002608 ORTHO05D003838 6.6e-10 68.2 173 45.1
C02p41770 Brassica napus HOM05D002608 ORTHO05D003838 6.6e-10 68.2 173 45.1
FvH4_6g07021 Fragaria vesca HOM05D002608 ORTHO05D003838 6.6e-10 68.2 153 45.8
FAN14G0019 Fragaria x ananassa HOM05D002608 ORTHO05D003838 6.6e-10 68.2 153 45.8
PGSC0003DMG400010999 Solanum tuberosum HOM05D002608 ORTHO05D003838 6.6e-10 68.2 165 44.8
FAN05G0606 Fragaria x ananassa HOM05D002608 ORTHO05D003838 8.6e-10 67.8 155 46.5
TWI12G0370 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 8.6e-10 67.8 172 40.7
GSVIVG01031192001 Vitis vinifera HOM05D002608 ORTHO05D003838 8.6e-10 67.8 90 65.6
BcaC04g21147 Brassica carinata HOM05D002608 ORTHO05D003838 1.1e-09 67.4 156 42.9
C09p35000 Brassica napus HOM05D002608 ORTHO05D003838 1.1e-09 67.4 156 42.9
BolC9t56346H Brassica oleracea HOM05D002608 ORTHO05D003838 1.1e-09 67.4 156 42.9
Glyma.03G172200 Glycine max HOM05D002608 ORTHO05D003838 1.1e-09 67.4 174 43.1
VMungo1383G2288 Vigna mungo HOM05D002608 ORTHO05D003838 1.1e-09 67.4 161 44.1
Aa31LG9G10810 Aethionema arabicum HOM05D002608 ORTHO05D003838 1.5e-09 67.0 178 44.4
Ah.04g154230 Amaranthus hybridus HOM05D002608 ORTHO05D013420 1.5e-09 67.0 175 41.1
A09p27650 Brassica napus HOM05D002608 ORTHO05D003838 1.9e-09 66.6 161 42.2
BraA09t38334Z Brassica rapa HOM05D002608 ORTHO05D003838 1.9e-09 66.6 161 42.2
CiPaw.07G025500 Carya illinoinensis HOM05D002608 ORTHO05D003838 2.5e-09 66.2 180 42.8
FAN01G2273 Fragaria x ananassa HOM05D002608 ORTHO05D013420 2.5e-09 66.2 105 57.1
FAN12G0216 Fragaria x ananassa HOM05D002608 ORTHO05D013420 2.5e-09 66.2 105 57.1
MD04G1196800 Malus domestica HOM05D002608 ORTHO05D003838 2.5e-09 66.2 169 43.2
AL6G45870 Arabidopsis lyrata HOM05D002608 ORTHO05D003838 3.3e-09 65.9 173 41.6
Hma1.2p1_1441F.1_g283600 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 3.3e-09 65.9 162 44.4
ClCG03G017600 Citrullus lanatus HOM05D002608 ORTHO05D003838 4.3e-09 65.5 173 42.8
Ciclev10000154m.g Citrus clementina HOM05D002608 ORTHO05D003838 4.3e-09 65.5 177 40.7
ECA247G1225 Erigeron canadensis HOM05D002608 ORTHO05D003838 4.3e-09 65.5 171 40.9
Lj1g0021618 Lotus japonicus HOM05D002608 ORTHO05D003838 4.3e-09 65.5 149 46.3
C03p35460 Brassica napus HOM05D002608 ORTHO05D003838 5.6e-09 65.1 174 37.9
FAN02G0527 Fragaria x ananassa HOM05D002608 ORTHO05D003838 5.6e-09 65.1 170 41.2
FAN03G2739 Fragaria x ananassa HOM05D002608 ORTHO05D013420 5.6e-09 65.1 147 45.6
BcaC01g04630 Brassica carinata HOM05D002608 ORTHO05D003838 7.3e-09 64.7 183 36.6
BolC3t15861H Brassica oleracea HOM05D002608 ORTHO05D003838 7.3e-09 64.7 176 36.9
DCAR_014838 Daucus carota HOM05D002608 ORTHO05D003838 7.3e-09 64.7 152 43.4
A03p29350 Brassica napus HOM05D002608 ORTHO05D003838 9.5e-09 64.3 174 42.0
ECA240G3079 Erigeron canadensis HOM05D002608 ORTHO05D003838 9.5e-09 64.3 182 40.1
CiPaw.09G189400 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.2e-08 63.9 167 46.1
CANSAT56G4271 Cannabis sativa HOM05D002608 ORTHO05D003838 1.6e-08 63.5 181 40.9
CsaV3_1G037240 Cucumis sativus L. HOM05D002608 ORTHO05D003838 1.6e-08 63.5 174 40.8
Atru.chr2.118 Acer truncatum HOM05D002608 ORTHO05D003838 2.1e-08 63.2 177 39.5
Aa31LG6G6570 Aethionema arabicum HOM05D002608 ORTHO05D003838 2.1e-08 63.2 181 41.4
EL10Ac4g09869 Beta vulgaris HOM05D002608 ORTHO05D003838 2.1e-08 63.2 185 43.8
Dinv24411 Davidia involucrata HOM05D002608 ORTHO05D003838 2.1e-08 63.2 110 49.1
BraA03t12132Z Brassica rapa HOM05D002608 ORTHO05D003838 2.8e-08 62.8 176 40.9
Lalb_Chr20g0113231 Lupinus albus HOM05D002608 ORTHO05D003838 2.8e-08 62.8 175 42.3
arahy.Tifrunner.gnm1.ann1.6UH7HR Arachis hypogaea HOM05D002608 ORTHO05D003838 3.6e-08 62.4 170 41.8
Thhalv10028395m.g Eutrema salsugineum HOM05D002608 ORTHO05D003838 4.7e-08 62.0 167 44.9
MBI01_g01189_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 4.7e-08 62.0 174 44.8
unitig_899.g15197 Utricularia gibba HOM05D002608 ORTHO05D003838 4.7e-08 62.0 115 49.6
arahy.Tifrunner.gnm1.ann1.PFNK2V Arachis hypogaea HOM05D002608 ORTHO05D003838 6.1e-08 61.6 170 41.2
BcaB01g02695 Brassica carinata HOM05D002608 ORTHO05D003838 6.1e-08 61.6 183 42.1
DCAR_022132 Daucus carota HOM05D002608 ORTHO05D003838 6.1e-08 61.6 161 29.8
THA.LOC104814584 Tarenaya hassleriana HOM05D002608 ORTHO05D003838 6.1e-08 61.6 178 39.9
RcHm_v2.0_Chr3g0456551 Rosa chinensis HOM05D002608 ORTHO05D003838 1.4e-07 60.5 175 38.9
Sed0023948 Sechium edule HOM05D002608 ORTHO05D003838 2.3e-07 59.7 175 38.3
PSO170G1119 Papaver somniferum HOM05D002608 ORTHO05D003838 3.0e-07 59.3 90 57.8
CARHR255150 Cardamine hirsuta HOM05D002608 ORTHO05D003838 4.0e-07 58.9 169 42.6
DCAR_003377 Daucus carota HOM05D002608 ORTHO05D003838 5.2e-07 58.5 161 44.1
PSO528G0014 Papaver somniferum HOM05D002608 ORTHO05D003838 5.2e-07 58.5 89 47.2
Ca_08785_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 6.8e-07 58.2 170 41.8
CiPaw.10G143500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.2e-06 57.4 175 43.4
AUR62034876 Chenopodium quinoa HOM05D002608 ORTHO05D013420 1.5e-06 57.0 153 46.4
Glyma.19G173100 Glycine max HOM05D002608 ORTHO05D003838 2.0e-06 56.6 169 40.8
HanXRQChr09g0247971 Helianthus annuus HOM05D002608 ORTHO05D003838 2.6e-06 56.2 118 52.5
Aqoxy7G00914 Aquilegia oxysepala HOM05D002608 ORTHO05D003838 3.4e-06 55.8 177 42.9
Cpa.g.sc48.127 Carica papaya HOM05D002608 ORTHO05D003838 3.4e-06 55.8 176 36.9
COL.COLO4_03801 Corchorus olitorius HOM05D002608 ORTHO05D003838 3.4e-06 55.8 96 47.9
Duzib177G0789 Durio zibethinus HOM05D002608 ORTHO05D003838 4.4e-06 55.5 169 39.1
HanXRQChr14g0452151 Helianthus annuus HOM05D002608 ORTHO05D003838 5.8e-06 55.1 179 40.8
Lj2A99G56 Lonicera japonica HOM05D002608 ORTHO05D003838 5.8e-06 55.1 57 49.1


User provided reference genes

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