Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 2.3e-196 688.7 355 100.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.9e-105 386.7 339 63.4
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 1.4e-95 354.0 343 58.9
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 2.7e-75 286.6 341 51.6
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.9e-74 283.1 354 51.1
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.5e-73 280.8 330 51.2
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 3.2e-73 279.6 332 49.4
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 5.5e-73 278.9 336 50.3
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 1.4e-71 274.2 331 51.1
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 2.6e-70 270.0 331 49.5
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 2.8e-69 266.5 335 49.6
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 3.1e-68 263.1 348 46.0
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 9.5e-65 251.5 333 47.7
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.8e-64 250.0 364 46.4
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.6e-64 249.6 333 48.0
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 4.7e-64 249.2 333 48.9
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 2.3e-63 246.9 336 46.7
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 5.2e-63 245.7 341 47.8
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 5.7e-62 242.3 333 45.6
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.1e-60 238.0 334 46.1
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.4e-60 237.7 352 42.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 5.4e-60 235.7 342 43.0
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 7.0e-60 235.3 332 44.6
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 2.7e-59 233.4 356 44.7
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.7e-59 233.4 333 45.0
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 2.7e-59 233.4 339 42.8
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 4.5e-59 232.6 225 59.6
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 7.8e-59 231.9 346 43.6
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 2.3e-58 230.3 334 44.0
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 2.3e-58 230.3 346 43.6
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 5.0e-58 229.2 350 43.7
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 6.6e-58 228.8 355 42.8
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 6.6e-58 228.8 339 43.1
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 2.5e-57 226.9 341 42.8
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 3.3e-57 226.5 348 42.5
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 3.3e-57 226.5 339 43.7
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 7.3e-57 225.3 355 42.0
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 2.1e-56 223.8 340 44.4
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 2.8e-56 223.4 348 42.5
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 2.8e-56 223.4 345 42.3
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 3.6e-56 223.0 343 40.5
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 4.7e-56 222.6 343 42.9
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 6.1e-56 222.2 364 39.8
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 1.0e-55 221.5 349 42.1
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.4e-55 221.1 339 42.2
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.8e-55 220.7 341 42.2
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 2.3e-55 220.3 330 43.9
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 5.2e-55 219.2 339 43.1
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 6.8e-55 218.8 349 42.4
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 6.8e-55 218.8 342 40.4
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.5e-54 217.6 343 42.0
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 2.6e-54 216.9 344 41.3
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 9.8e-54 214.9 345 42.0
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.2e-53 213.8 339 43.1
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.9e-53 213.4 341 41.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 3.7e-53 213.0 345 40.6
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.7e-53 213.0 347 40.1
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 4.9e-53 212.6 357 40.6
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.4e-52 211.1 345 39.7
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 2.4e-52 210.3 336 42.6
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 3.2e-52 209.9 339 41.3
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 7.0e-52 208.8 427 38.2
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 9.2e-52 208.4 339 40.7
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 9.2e-52 208.4 344 40.4
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.2e-51 208.0 343 40.8
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.2e-51 208.0 343 42.0
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 3.5e-51 206.5 343 41.7
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 4.6e-51 206.1 343 41.7
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 4.6e-51 206.1 342 40.1
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 5.0e-50 202.6 301 42.5
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.1e-49 201.4 354 40.4
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 4.3e-49 199.5 203 55.7
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 8.1e-48 195.3 178 59.0
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.2e-45 187.2 203 53.7
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 2.9e-45 186.8 349 39.3
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 4.9e-45 186.0 306 39.9
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 2.4e-44 183.7 223 51.1
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.6e-43 181.0 166 57.2
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 2.7e-43 180.3 348 37.9
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 3.5e-43 179.9 350 38.9
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 7.8e-43 178.7 336 39.3
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 3.9e-42 176.4 312 40.7
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.5e-41 174.5 229 46.7
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.6e-40 171.0 424 34.7
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 8.1e-40 168.7 186 52.2
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 8.1e-40 168.7 134 65.7
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 8.9e-39 165.2 345 38.0
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 2.6e-38 163.7 179 53.6
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 5.8e-38 162.5 351 36.8
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 2.9e-37 160.2 329 38.3
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 7.1e-36 155.6 205 48.3
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 3.5e-35 153.3 280 41.4
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 7.8e-35 152.1 166 52.4
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 1.2e-32 144.8 142 57.0
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.1e-32 144.1 172 50.6
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 3.1e-31 140.2 259 38.2
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.3e-29 134.8 321 35.8
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.2e-27 128.3 199 39.7
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.0e-26 125.2 185 47.0
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 3.0e-26 123.6 82 75.6
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 3.9e-26 123.2 166 47.6
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 2.8e-24 117.1 249 36.5
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 8.1e-24 115.5 351 28.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 5.3e-23 112.8 345 28.4
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 2.6e-22 110.5 168 43.5
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 2.9e-21 107.1 366 28.1
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 7.1e-20 102.4 161 39.8
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 7.9e-19 99.0 188 39.4
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.5e-17 94.7 316 29.4
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 8.7e-10 68.9 134 38.8
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 8.7e-10 68.9 134 38.8
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 4.3e-09 66.6 147 36.1
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 5.6e-09 66.2 112 40.2
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 2.1e-08 64.3 93 44.1
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 2.6e-06 57.4 191 28.3


User provided reference genes

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